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LungCancerLines

This is the development version of LungCancerLines; for the stable release version, see LungCancerLines.

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3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11

Reads from Two Lung Cancer Cell Lines

DOI: 10.18129/B9.bioc.LungCancerLines

Bioconductor version: Development (3.24)

Reads from an RNA-seq experiment between two lung cancer cell lines: H1993 (met) and H2073 (primary). The reads are stored as Fastq files and are meant for use with the TP53Genome object in the gmapR package.

Author: Cory Barr, Michael Lawrence

Maintainer: Michael Lawrence <michafla at gene.com>

Citation (from within R, enter citation("LungCancerLines")):

Cory Barr, Michael Lawrence. LungCancerLines: Reads from Two Lung Cancer Cell Lines. doi:10.18129/B9.bioc.LungCancerLines, R package version 0.51.0, https://bioconductor.org/packages/LungCancerLines.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("LungCancerLines")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Details

Package Archives

Follow Installation instructions to use this package in your R session.