source("http://bioconductor.org/biocLite.R")
biocLite("LungCancerLines")

LungCancerLines

Reads from Two Lung Cancer Cell Lines

Bioconductor version: 2.13

Reads from an RNA-seq experiment between two lung cancer cell lines: H1993 (met) and H2073 (primary). The reads are stored as Fastq files and are meant for use with the TP53Genome object in the gmapR package.

Author: Cory Barr, Michael Lawrence

Maintainer: Cory Barr <barr.cory at gene.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("LungCancerLines")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LungCancerLines")

 

PDF		Reference Manual

Details

biocViews	ExperimentData
Version	0.0.10
License	Artistic-2.0
Depends
Imports	Rsamtools
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	gmapR, HTSeqGenie, VariantTools

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	LungCancerLines_0.0.10.tar.gz
Windows Binary	LungCancerLines_0.0.10.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	LungCancerLines_0.0.10.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats