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cn.farms

This is the development version of cn.farms; for the stable release version, see cn.farms.

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cn.FARMS - factor analysis for copy number estimation

DOI: 10.18129/B9.bioc.cn.farms

Bioconductor version: Development (3.24)

This package implements the cn.FARMS algorithm for copy number variation (CNV) analysis. cn.FARMS allows to analyze the most common Affymetrix (250K-SNP6.0) array types, supports high-performance computing using snow and ff.

Author: Andreas Mitterecker, Djork-Arne Clevert

Maintainer: Andreas Mitterecker <mitteran11 at gmail.com>

Citation (from within R, enter citation("cn.farms")):

Andreas Mitterecker, Djork-Arne Clevert. cn.farms: cn.FARMS - factor analysis for copy number estimation. doi:10.18129/B9.bioc.cn.farms, R package version 1.61.0, https://bioconductor.org/packages/cn.farms.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("cn.farms")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cn.farms")

Details

Package Archives

Follow Installation instructions to use this package in your R session.