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HDO.db

This is the development version of HDO.db; for the stable release version, see HDO.db.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16

A set of annotation maps describing the entire Human Disease Ontology


Bioconductor version: Development (3.24)

A set of annotation maps describing the entire Human Disease Ontology assembled using data from DO. Its annotation data comes from https://github.com/DiseaseOntology/HumanDiseaseOntology/tree/main/src/ontology.

Author: Erqiang Hu [aut, cre] ORCID iD ORCID: 0000-0002-1798-7513

Maintainer: Erqiang Hu <13766876214 at 163.com>

Citation (from within R, enter citation("HDO.db")):

Erqiang Hu. HDO.db: A set of annotation maps describing the entire Human Disease Ontology. doi:10.18129/B9.bioc.HDO.db, R package version 1.0.0, https://bioconductor.org/packages/HDO.db.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("HDO.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HDO.db")
HDO_vignette HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews AnnotationData, FunctionalAnnotation
Version1.0.0
In Bioconductor sinceBioC 3.16 (R-4.2) (4 years)
License Artistic-2.0
Depends R (>= 4.2.0)
Imports AnnotationDbi, DBI, methods, utils
System Requirements
URL
Bug Reportshttps://github.com/huerqiang/HDO.db/issues
See More
Suggests rmarkdown, knitr, testthat (>= 3.0.0)
Linking To
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Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HDO.db_1.0.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64)
macOS Binary (sonoma-arm64)
Package Short Url https://bioconductor.org/packages/HDO.db/
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