Rhdf5lib

This is the development version of Rhdf5lib; for the stable release version, see Rhdf5lib.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6

hdf5 library as an R package

Bioconductor version: Development (3.24)

Provides C and C++ hdf5 libraries.

Author: Mike Smith [ctb] ORCID: 0000-0002-7800-3848 , Hugo Gruson [cre] ORCID: 0000-0002-4094-1476 , The HDF Group [cph]

Maintainer: Hugo Gruson <hugo.gruson at embl.de>

Citation (from within R, enter citation("Rhdf5lib")):

Mike Smith, Hugo Gruson, The HDF Group. Rhdf5lib: hdf5 library as an R package. doi:10.18129/B9.bioc.Rhdf5lib, R package version 2.1.0, https://bioconductor.org/packages/Rhdf5lib.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("Rhdf5lib")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rhdf5lib")

Linking to Rhdf5lib	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Infrastructure, Software
Version	2.1.0
In Bioconductor since	BioC 3.6 (R-3.4) (9 years)
License	Artistic-2.0
Depends	R (>= 4.2.0)
Imports
System Requirements
URL	https://github.com/Huber-group-EMBL/Rhdf5lib
Bug Reports	https://github.com/Huber-group-EMBL/Rhdf5lib/issues

Suggests	BiocStyle, knitr, rmarkdown, tinytest, mockery
Linking To	biocmake
Enhances
Depends On Me
Imports Me	epigraHMM, ondisc, rhdf5
Suggests Me	mbkmeans
Links To Me	alabaster.base, beachmat.hdf5, BigDataStatMeth, chihaya, cytolib, CytoML, DropletUtils, epigraHMM, flowWorkspace, h5mread, mbkmeans, methylclock, mzR, ncdfFlow, ondisc, rhdf5, rhdf5filters, smer, stPipe
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	Rhdf5lib_2.1.0.tar.gz
Windows Binary (x86_64)	Rhdf5lib_2.1.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	Rhdf5lib_2.1.0.tgz
macOS Binary (sonoma-arm64)	Rhdf5lib_2.1.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/Rhdf5lib
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/Rhdf5lib
Package Short Url	https://bioconductor.org/packages/Rhdf5lib/
Package Downloads Report	Download Stats