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MBCB

This is the development version of MBCB; for the stable release version, see MBCB.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7

MBCB (Model-based Background Correction for Beadarray)


Bioconductor version: Development (3.24)

This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Author: Yang Xie <Yang.Xie at UTSouthwestern.edu>

Maintainer: Bo Yao <Bo.Yao at UTSouthwestern.edu>

Citation (from within R, enter citation("MBCB")):

Yang Xie. MBCB: MBCB (Model-based Background Correction for Beadarray). doi:10.18129/B9.bioc.MBCB, R package version 1.67.0, https://bioconductor.org/packages/MBCB.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("MBCB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MBCB")
MBCB PDF R Script
Reference ManualPDF

Details

biocViews Microarray, Preprocessing, Software
Version1.67.0
In Bioconductor sinceBioC 2.7 (R-2.12) (16 years)
License GPL (>=2)
Depends R (>= 2.9.0), tcltk, tcltk2
Imports preprocessCore, stats, utils
System Requirements
URLhttps://qbrc.swmed.edu/
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MBCB_1.67.0.tar.gz
Windows Binary (x86_64) MBCB_1.67.0.zip
macOS Binary (big-sur-x86_64) MBCB_1.67.0.tgz
macOS Binary (sonoma-arm64) MBCB_1.67.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/MBCB
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/MBCB
Package Short Url https://bioconductor.org/packages/MBCB/
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