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MANOR

This is the development version of MANOR; for the stable release version, see MANOR.

All versions 3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10, 2.9, 2.8, 2.7, 2.6, 2.5

CGH Micro-Array NORmalization


Bioconductor version: Development (3.24)

Importation, normalization, visualization, and quality control functions to correct identified sources of variability in array-CGH experiments.

Author: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>, Philippe Hupé <philippe.hupe at curie.fr>

Maintainer: Pierre Neuvial <pierre.neuvial at math.cnrs.fr>

Citation (from within R, enter citation("MANOR")):

Pierre Neuvial, Philippe Hupé. MANOR: CGH Micro-Array NORmalization. doi:10.18129/B9.bioc.MANOR, R package version 1.85.0, https://bioconductor.org/packages/MANOR.

Generated from the package metadata; it may differ from the package's own citation.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("MANOR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MANOR")
Overview of the MANOR package HTML R Script
Reference ManualPDF
NEWSText

Details

biocViews CopyNumberVariation, DataImport, Microarray, Normalization, Preprocessing, QualityControl, Software, TwoChannel
Version1.85.0
In Bioconductor sinceBioC 1.7 (R-2.2) (21 years)
License GPL-2
Depends R (>= 2.10)
Imports GLAD, graphics, grDevices, stats, utils
System Requirements
URLhttp://bioinfo.curie.fr/projects/manor/index.html
Bug Reportshttps://github.com/pneuvial/MANOR/issues
See More
Suggests knitr, rmarkdown, bookdown
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Build Report Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MANOR_1.85.0.tar.gz
Windows Binary (x86_64)
macOS Binary (big-sur-x86_64) MANOR_1.85.0.tgz
macOS Binary (sonoma-arm64) MANOR_1.85.0.tgz
Source Repositorygit clone https://git.bioconductor.org/packages/MANOR
Source Repository (Developer Access)git clone git@git.bioconductor.org:packages/MANOR
Package Short Url https://bioconductor.org/packages/MANOR/
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