db_get {hypeR} | R Documentation

## Fetch downloaded gene sets from msigdb

### Description

Fetch downloaded gene sets from msigdb

### Usage

    db_get(msigdb_info, symbol = c("C1", "C2.CGP", "C2.CP", "C2.CP.BIOCARTA",
      "C2.CP.KEGG", "C2.CP.REACTOME", "C3.MIR", "C3.TFT", "C4.CGN", "C4.CM",
      "C5.BP", "C5.CC", "C5.MF", "C6", "C7", "H"))

### Arguments

`msigdb_info` | A list containing the gene set directory and version number of gene sets
`symbol` | A symbol corresponding to a msigdb gene set

### Value

A list of gene sets

### Examples

    msigdb_info <- download_msigdb()
    REACTOME <- db_get(msigdb_info, "C2.CP.REACTOME")

[Package hypeR version 1.00.0 Index]