download_msigdb {hypeR} | R Documentation

## Download all gene sets from msigdb for a given species

### Description

Download all gene sets from msigdb for a given species

### Usage

    download_msigdb(species = "Homo sapiens", output_dir = NULL)

### Arguments

`species` | A species to determine gene symbols (refer to ?msigdbr::msigdbr for avilable species)
`output_dir` | A directory path where gene sets are downloaded instead of to the package location

### Value

A list containing the output directory and version number of gene sets

### Examples

    msigdb_info <- download_msigdb()

[Package hypeR version 1.00.0 Index]