results {RNAdecay} | R Documentation

## Example double exponential decay modeling results

### Description

Example results from maximum likelihood modeling of double exponential RNA decay of 118 genes. Results include parameter estimates, selected model, and alpha and beta groupings.

### Usage

    results

### Format

a data frame with 18 columns and 118 rows.

alpha_XXX

  decay rate estimate of genotype XXX, in per time (min^-1)

beta_XXX

  decay of decay rate estimate of genotype XXX, in per time (min^-1)

sigma2

  variance estimate

model

  selected model number

alpha_grp

  model alpha grouping number

beta_grp

  model beta grouping number

alpha_subgroup

  model alpha subgroup number

alphaPattern

  model alpha subgroup pattern; i.e. order of genotypes of increaseing decay rate

betaPattern

  model beta subgroup pattern; i.e. order of genotypes of increaseing decay of decay rate

rA_XXX

  relative alpha value of genotype XXX compared to WT

nEqMods

  number of models that were not different than the selected model based on a AICc difference <2

nEqAgp

  number of alpha groups represented in nEqMods

### Source

Sorenson et al. (2017) Submitted; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE86361

[Package RNAdecay version 1.3.1 Index]