significantPathway3-class {pathVar} | R Documentation

## Class `"significantPathway3"`

### Description

This is a class representation for storing the output of the `sigPway` function in the two sample case.

### Objects from the Class

Objects are output by the function `sigPway` in the two sample case. Objects can be created by calls of the form `new("significantPathway3", ...)`.

### Slots

`genesInSigPways1`:

  A `"list"` ojbect that contains the genes belonging to each significant pathway in group 1.

`genesInSigPways2`:

  A `"list"` ojbect that contains the genes belonging to each significant pathway in group 2.

`sigCatPerPway`:

  A `"list"` ojbect that contains the significant categories in each pathway.

`thresPValue`:

  A `"numeric"` object that contains the chosen p-value for the significance.

### Methods

No methods defined with class "significantPathway3" in the signature.

### Author(s)

Laurence de Torrente, Samuel Zimmerman, Jessica Mar

### Examples

    sig <- new("significantPathway3",genesInSigPways1=list(),genesInSigPways2=list(),sigCatPerPway=list(),thresPValue=numeric())
    showClass("significantPathway3")

[Package pathVar version 1.12.0 Index]