getAssayDataOfStudies {RImmPort} | R Documentation

## Get specific assay data of one or more studies from the ImmPort database

### Description

Get specific assay data of one or more studies from the ImmPort database

### Usage

    getAssayDataOfStudies(study_ids, assay_type)

### Arguments

`study_ids` | List of study indentifiers
`assay_type` | Assay Type

### Value

a list of 1) domain data of specicifc assay technology and 2) any supplemental domain data of the studies

### Author(s)

Ravi Shankar

### Examples

    library(DBI)
    library(sqldf)
    studies_dir <- system.file("extdata", "ImmPortStudies", package = "RImmPort")
    db_dir <- file.path(studies_dir, "Db")
    sqlite_conn <- dbConnect(SQLite(), dbname=file.path(db_dir, "ImmPort.sqlite"))
    setImmPortDataSource(sqlite_conn)
    elispot_l <- getAssayDataOfStudies("SDY139", "ELISPOT")
    if (length(elispot_l) > 0)
      names(elispot_l)
    head(elispot_l$zb_df)

[Package RImmPort version 1.7.2 Index]