# Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis.

## Documentation for package ‘matchBox’ version 1.16.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

matchBox-package | A package to produce Correspondence-At-Top plots (CAT-plots) between ranked list of genes.
calcHypPI | Probability intervals calculation for CAT curves using the hypergeometric distribution.
computeCat | Computing overlap proportions among ordered vectors
filterRedundant | This functions removes redundant features from a data.frame
matchBox | A package to produce Correspondence-At-Top plots (CAT-plots) between ranked list of genes.
matchBoxExpression | Example data: ranking from three differential gene expression experiments
mergeData | Merging data.frames based on common identifiers
plotCat | Plotting correspondence at the top curves