# Generated by roxygen2: do not edit by hand

S3method(base::nrow,reanno)
S3method(length,reanno)
S3method(names,reanno)
export(PAC)
export(PAC_analyze)
export(PAC_annotate)
export(PAC_check)
export(PAC_covplot)
export(PAC_create)
export(PAC_deseq)
export(PAC_filter)
export(PAC_filtsep)
export(PAC_gtf)
export(PAC_jitter)
export(PAC_map)
export(PAC_mapper)
export(PAC_nbias)
export(PAC_norm)
export(PAC_pca)
export(PAC_pie)
export(PAC_saturation)
export(PAC_sizedist)
export(PAC_stackbar)
export(PAC_summary)
export(PAC_trna)
export(Seqpac)
export(add_reanno)
export(anno)
export(as.PAC)
export(as.reanno)
export(counts)
export(filtsep_bin)
export(full)
export(import_reanno)
export(make_PAC)
export(make_conv)
export(make_counts)
export(make_cutadapt)
export(make_pheno)
export(make_reanno)
export(make_trim)
export(map_rangetype)
export(map_reanno)
export(merge_lanes)
export(norm)
export(overview)
export(pheno)
export(reanno)
export(show.PAC)
export(simplify_reanno)
export(summary)
export(tRNA_class)
exportClasses(PAC)
exportClasses(reanno)
exportMethods("anno<-")
exportMethods("counts<-")
exportMethods("full<-")
exportMethods("norm<-")
exportMethods("overview<-")
exportMethods("pheno<-")
exportMethods("summary<-")
exportMethods(anno)
exportMethods(colnames)
exportMethods(counts)
exportMethods(full)
exportMethods(length)
exportMethods(names)
exportMethods(ncol)
exportMethods(norm)
exportMethods(nrow)
exportMethods(overview)
exportMethods(pheno)
exportMethods(rownames)
exportMethods(summary)
import(stats)
importClassesFrom(tibble,tbl_df)
importFrom(S4Vectors,mcols)
importFrom(ggplot2,
  aes,
  after_stat,
  geom_hline,
  geom_point,
  geom_vline,
  scale_colour_gradient,
  theme,
  theme_minimal,
  xlab,
  ylab
)
importFrom(methods,
  as,
  is,
  new,
  setMethod
)
importFrom(stats,terms.formula)
importFrom(utils,read.csv)
