23fac68d10eb28e90542993f58af2a6e *DESCRIPTION
185bec35dc22bd55a78437daeeac44eb *NAMESPACE
ddca08efd58d20b95abf30448e5507de *NEWS.md
267e6c4dc81dcc4cd2a3d4ba3884edf6 *R/1_getMarkerPositivity.R
bc60926a3a8415cc4c6919e595792574 *R/2_assignMarkerCombinations.R
32add1ffba3ff2e496a4abf046dd1244 *R/3_calcPolyfunctionality.R
4c496609c6be77d80dcf5ddaef5b4434 *R/4_extractCellCounts.R
163572163cf8e7957a14a59b13a0245d *R/5_plotFunctions.R
8b8c81dba0adb45cf1606a7ebf689c2a *R/helpers.R
eac56025d83bc2509327d5ae26e2b33a *R/utils-pipe.R
0f3e11e574e0cc85052db59ed7b9a801 *README.md
5ed42f0cf2cb775949e177e7126ac7ac *build/vignette.rds
303768c05ad69ccee48cbb100e94df0b *inst/doc/getting_started.R
3411cb186aee52d5d2f831ba1bdb260d *inst/doc/getting_started.Rmd
93ec4bb6db3b39609e60f8f40d43f1f1 *inst/doc/getting_started.html
14f8c260a11721e07b24282c8162d7af *inst/extdata/ID001_gag.fcs
c6a317c1f7c5875d492b2cba1e8d8fb5 *inst/extdata/ID001_unstim.fcs
602fd4180bc2b7fe997d881baa818f11 *inst/extdata/README.txt
1858d20eab7785a1758703c596498170 *inst/extdata/cell_labels.rds
5933488bd995ef48743bf82eb9d013e6 *inst/extdata/gatingTemp_cytokines.csv
388e6dcd542e8269363d3e16c788ac8c *inst/extdata/metadata.csv
473330dca00681af9a91af47ba0978cd *man/assignMarkerCombinations.Rd
82b23cfc9fbc296df3d7db387c982a4f *man/calcPolyfunctionality.Rd
781e5b8f1de83c523d0e48ddc2ed2257 *man/extractCellCounts.Rd
e9965051bec8c69fb03254dbcfaa9244 *man/figures/polyICSFlow.png
ed10f5d362b8ef6bf7cbfa2b0ae6ba27 *man/figures/workflow.png
90b52c95a63c4e4613996dbb0b9ad0ab *man/getMarkerPositivity.Rd
3d0fa8f38fcae1a96318577eedbb3315 *man/pipe.Rd
9986fc497ef07337f748f5bd36318f8c *man/plotCellCountsAtLeast.Rd
4cea38deddbd9ca74c4ae5429e6e22ca *man/plotCellCountsExactly.Rd
47e195f11873623e03269181c1118279 *man/plotMarkerComb2DScatters.Rd
685eeffb8f79a89c4eab14279db7dc97 *man/plotMarkerCombHeatmap.Rd
ea02fcd849d29eb8b7061334913b00c3 *tests/testthat.R
4d2f5db980bd4b9c1e0538a4a7db9fea *tests/testthat/GatingSet/7505f862-2233-4256-b379-0e0c1b138a07.gs
5288396a789e3b01a2e0dcc15a7980ee *tests/testthat/GatingSet/ID001_gag.fcs.h5
11a10c00c7047d959096541669a98c7a *tests/testthat/GatingSet/ID001_gag.fcs.pb
bfac924ccf22f5ccec5dc43fc1303d01 *tests/testthat/GatingSet/ID001_unstim.fcs.h5
70a9ecb2d8bf269030fe10e0a390641d *tests/testthat/GatingSet/ID001_unstim.fcs.pb
3c813ef1e02f6bf13e7324bcefeeed29 *tests/testthat/reference1.rds
984b9a3056d7a3af580a0af4a9b314db *tests/testthat/reference2_exhaustive.rds
4910a1e1b741df33cd364874a8d2e39e *tests/testthat/reference2_exhaustive_md.rds
2ed29a41b30e740d40ae36a7dc1f9108 *tests/testthat/reference2_simple.rds
ba0e5f7b9f83f0d1c386aeb3b57f5608 *tests/testthat/reference3.rds
eb36e4a7d1234df64051397e800943a9 *tests/testthat/test-1_getMarkerPositivity.R
1133d354af90817284824338044a4d91 *tests/testthat/test-2_assignMarkerCombinations.R
d0844f6a09ee7170fdd0389c88d1c650 *tests/testthat/test-3_calcPolyfunctionality.R
6419f2d219012f9c9da29d73b6325bd9 *vignettes/figures/assignMarkerCombinations_modes.png
be303b68adb0bc6195e5071fb02d6203 *vignettes/figures/workflow_extended.png
3411cb186aee52d5d2f831ba1bdb260d *vignettes/getting_started.Rmd
