a7c71a0ee7074d27455f4739456557dd *DESCRIPTION
3cfa062c081cca237a7aa6962bfb255e *NAMESPACE
63914b780aa4c34074d06b63795cf497 *NEWS.md
271dd17abccf540ab8ddf56f9ac8a9ca *R/globals.R
85c43124bec28813f9599e5abfc2868b *R/karioCaS-package.R
34b199b3674263cfe2f1acb09cfbb633 *R/kariocas_001_import.R
17e76a8bd3f51bbb2e373f203a61078b *R/kariocas_002_taxa_retention.R
ce252fef3484aa1fe0ad54d646f8c4e2 *R/kariocas_003_reads_per_taxa.R
cac22568ef5057048d5ed90c506fa19c *R/kariocas_004_retrieve_selected_taxa.R
d996d5ab6f91a9db3e2ea7a0b4b78589 *R/kariocas_005_upset_kariocas.R
79cded3283a13f34c3cb9f19028c9b0e *R/kariocas_006_heatmaps.R
41f9291415568da549b2107714e8cc0e *R/kariocas_007_taxa_resolution.R
693c2daa8168777716a998890d2530e4 *R/kariocas_008_group_upset.R
20697f25c40074191bef9b3ded929cab *R/kariocas_style.R
ee37e738806d99d0456ba9083a60bcc1 *R/utils_cs.R
fe58b6d58ba45ae12252a30ace30057c *R/utils_data_conversion.R
58a0f09489e06ee8cfaf0bda4c9f6101 *R/utils_export.R
f8a64f9a7b8f15fc6495944063990d4c *R/utils_group_plot.R
de56d201a3568f28d8995f1cb079ddd8 *R/utils_si.R
cc7c78c2272588e36b0218c19eccff51 *README.md
90fb244f69dd3ddce1faf057a9607737 *build/vignette.rds
f88c04cdd75ff93c5c84a63266fb0196 *inst/doc/karioCaS_workflow.R
1f35fe8d8b9bf70d155b6d419eb49b2a *inst/doc/karioCaS_workflow.Rmd
4052bcedc264d217869ec6918cd51b9b *inst/doc/karioCaS_workflow.html
b246d2dbfcd0e8fdc09130a13084c905 *inst/extdata/your_project_name/000_mpa_original/SAMPLE01_CS00.mpa
925f9911093d7c3fc00e66c3525c9cf8 *inst/extdata/your_project_name/000_mpa_original/SAMPLE01_CS02.mpa
39c29823fe1194cf689a17430e9a1117 *inst/extdata/your_project_name/000_mpa_original/SAMPLE01_CS04.mpa
b732ba79e3272310efe1706a7ca6060d *inst/extdata/your_project_name/000_mpa_original/SAMPLE01_CS06.mpa
12b80241089cccce90f59d0521792f90 *inst/extdata/your_project_name/000_mpa_original/SAMPLE01_CS08.mpa
8cd7ce1f6d21c41efbbfcefb4ca5f082 *inst/extdata/your_project_name/000_mpa_original/SAMPLE01_CS09.mpa
e6c2d197884ab9459d7cdb58cd620ecb *inst/script/toy_data_provenance.md
eaf28611e4cd05b4bb72c7cfca4f9914 *man/group_upset.Rd
0bb4e8fadc318b0a85c42c47321adf9c *man/heatmaps_karioCaS.Rd
01161172b65fe40c5bd93e3e2e759e72 *man/import_karioCaS.Rd
376c32aa9f5a8e212b82e11e4f66bd77 *man/karioCaS-package.Rd
b3af07d26dc8bae20e96d87c3e3e6d95 *man/kariocas_result.Rd
7d21cfc5eb532b88251ec176ac572cfb *man/reads_per_taxa.Rd
c726375df01e831e2680d0524335e038 *man/retrieve_selected_taxa.Rd
e173af4efc4703935827f746c6dafc4c *man/taxa_resolution.Rd
1df8e221df847c72cb8a787966bbcf6a *man/taxa_retention.Rd
98f7ba12955a1f4ac62ea497ba66de00 *man/upset_kariocas.Rd
be92c725d6d5ea9089c05ac0467168b3 *tests/testthat.R
1caba99855097b3210f13a8f0057d66d *tests/testthat/test-001-import.R
ecf2b3e90ce02b1a6b41704bce282d53 *tests/testthat/test-002-taxa-retention.R
99edbd2d5f3a5982c07d3aa732fa255d *tests/testthat/test-003-reads.R
ae16fd418c5ce1b38fc8aa9d63c18401 *tests/testthat/test-004-retrieve.R
82b6738fb188744857772d79635809ca *tests/testthat/test-005-upset.R
140fc774ccfb7c1465490f50e202e78e *tests/testthat/test-006-heatmaps.R
b9b7e27ff25c437621b79ba70eb04a81 *tests/testthat/test-007-resolution.R
2387a27ec3b09edce2705d241ad2a1e4 *tests/testthat/test-008-group-upset.R
ce6cf54b06f7ba9680b29957e993ff03 *tests/testthat/test-cs-encoding.R
08aec5992f25cca2a6f57edbfd591324 *tests/testthat/test-group-overlay.R
e80d882b1366f63c8a6a6097f6afcd44 *tests/testthat/test-optimize-methods.R
26e1c6307ace49ef85a8053ffb3fce73 *tests/testthat/test-si-methods.R
1f35fe8d8b9bf70d155b6d419eb49b2a *vignettes/karioCaS_workflow.Rmd
