HiTC

This is the development version of HiTC; for the stable release version, see HiTC.

All versions

3.24 (devel), 3.23 (release), 3.22, 3.21, 3.20, 3.19, 3.18, 3.17, 3.16, 3.15, 3.14, 3.13, 3.12, 3.11, 3.10, 3.9, 3.8, 3.7, 3.6, 3.5, 3.4, 3.3, 3.2, 3.1, 3.0, 2.14, 2.13, 2.12, 2.11, 2.10

Bioconductor version: Development (3.24)

Author:

Maintainer: Nicolas Servant <nicolas.servant at curie.fr>

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

## The following initializes the development version of Bioconductor
BiocManager::install(version = "devel")

BiocManager::install("HiTC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HiTC")

Hi-C data analysis using HiTC	PDF	R Script
Introduction to HiTC package	PDF	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Software
Version	1.57.0
In Bioconductor since	BioC 2.10 (R-2.15) (14.5 years)
License
Depends
Imports
System Requirements
URL

Suggests
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	adjclust, HiCDataHumanIMR90, HiCDCPlus
Links To Me
Build Report	Build Report, r-universe

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	HiTC_1.57.0.tar.gz
Windows Binary (x86_64)	HiTC_1.57.0.zip (64-bit only)
macOS Binary (big-sur-x86_64)	HiTC_1.57.0.tgz
macOS Binary (sonoma-arm64)	HiTC_1.57.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/HiTC
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/HiTC
Package Short Url	https://bioconductor.org/packages/HiTC/
Package Downloads Report	Download Stats