scrapper-package	scrapper-package
adt_quality_control	adt_quality_control
adt_quality_control_defaults	adt_quality_control_defaults
aggregateAcrossCells	aggregateAcrossCells
aggregateAcrossCells.se	aggregateAcrossCells.se
aggregateAcrossCellsDefaults	aggregateAcrossCellsDefaults
aggregateAcrossGenes	aggregateAcrossGenes
aggregateAcrossGenes.se	aggregateAcrossGenes.se
aggregateAcrossGenesDefaults	aggregateAcrossGenesDefaults
aggregateColData	aggregateAcrossCells.se
analyze	defunct
analyze.se	analyze.se
buildSnnGraph	buildSnnGraph
buildSnnGraphDefaults	buildSnnGraphDefaults
centerSizeFactors	centerSizeFactors
centerSizeFactorsDefaults	centerSizeFactorsDefaults
centerSpikeInFactors	centerSpikeInFactors
centerSpikeInFactorsDefaults	centerSpikeInFactorsDefaults
chooseHighlyVariableGenes	chooseHighlyVariableGenes
chooseHighlyVariableGenesDefaults	chooseHighlyVariableGenesDefaults
choosePseudoCount	choosePseudoCount
choosePseudoCountDefaults	choosePseudoCountDefaults
chooseRnaHvgs.se	chooseRnaHvgs.se
chooseRnaHvgsWithSpikeIns.se	chooseRnaHvgsWithSpikeIns.se
clusterGraph	clusterGraph
clusterGraph.se	clusterGraph.se
clusterGraphDefaults	clusterGraphDefaults
clusterKmeans	clusterKmeans
clusterKmeans.se	clusterKmeans.se
clusterKmeansDefaults	clusterKmeansDefaults
combineFactors	combineFactors
computeAdtQcMetrics	adt_quality_control
computeAdtQcMetricsDefaults	adt_quality_control_defaults
computeBlockWeights	computeBlockWeights
computeBlockWeightsDefaults	computeBlockWeightsDefaults
computeClrm1Factors	computeClrm1Factors
computeClrm1FactorsDefaults	computeClrm1FactorsDefaults
computeCrisprQcMetrics	crispr_quality_control
computeCrisprQcMetricsDefaults	crispr_quality_control_defaults
computeRnaQcMetrics	rna_quality_control
computeRnaQcMetricsDefaults	rna_quality_control_defaults
computeRnaQcMetricsWithAltExps	quickRnaQc.se
convertAnalyzeResults	defunct
correctMnn	correctMnn
correctMnn.se	correctMnn.se
correctMnnDefaults	correctMnnDefaults
countGroupsByBlock	countGroupsByBlock
crispr_quality_control	crispr_quality_control
crispr_quality_control_defaults	crispr_quality_control_defaults
DelayedArray,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
dim,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
dimnames,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
extract_array,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
extract_sparse_array,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
filterAdtQcMetrics	adt_quality_control
filterCrisprQcMetrics	crispr_quality_control
filterRnaQcMetrics	rna_quality_control
fitVarianceTrend	fitVarianceTrend
fitVarianceTrendDefaults	fitVarianceTrendDefaults
formatComputeAdtQcMetricsResult	quickAdtQc.se
formatComputeCrisprQcMetricsResult	quickCrisprQc.se
formatComputeRnaQcMetricsResult	quickRnaQc.se
formatModelGeneVariancesResult	chooseRnaHvgs.se
formatScoreMarkersResult	scoreMarkers.se
getTestAdtData.se	getTestData.se
getTestCrisprData.se	getTestData.se
getTestData.se	getTestData.se
getTestRnaData.se	getTestData.se
initializeCpp,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
is_sparse,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
LogNormalizedMatrix	LogNormalizedMatrix
LogNormalizedMatrix-class	LogNormalizedMatrix
LogNormalizedMatrixSeed	LogNormalizedMatrix
LogNormalizedMatrixSeed-class	LogNormalizedMatrix
matrixClass,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
modelGeneVariances	modelGeneVariances
modelGeneVariancesDefaults	modelGeneVariancesDefaults
normalizeAdtCounts.se	normalizeAdtCounts.se
normalizeCounts	normalizeCounts
normalizeCountsDefaults	normalizeCountsDefaults
normalizeCrisprCounts.se	normalizeCrisprCounts.se
normalizeRnaCounts.se	normalizeRnaCounts.se
normalizeRnaCountsWithSpikeIns.se	normalizeRnaCountsWithSpikeIns.se
previewMarkers	scoreMarkers.se
quickAdtQc.se	quickAdtQc.se
quickCrisprQc.se	quickCrisprQc.se
quickRnaQc.se	quickRnaQc.se
reportGroupMarkerStatistics	reportGroupMarkerStatistics
rna_quality_control	rna_quality_control
rna_quality_control_defaults	rna_quality_control_defaults
runAllNeighborSteps	runAllNeighborSteps
runAllNeighborSteps.se	runAllNeighborSteps.se
runPca	runPca
runPca.se	runPca.se
runPcaDefaults	runPcaDefaults
runTsne	runTsne
runTsne.se	runTsne.se
runTsneDefaults	runTsneDefaults
runUmap	runUmap
runUmap.se	runUmap.se
runUmapDefaults	runUmapDefaults
sanitizeSizeFactors	sanitizeSizeFactors
sanitizeSizeFactorsDefaults	sanitizeSizeFactorsDefaults
scaleByNeighbors	scaleByNeighbors
scaleByNeighbors.se	scaleByNeighbors.se
scaleByNeighborsDefaults	scaleByNeighborsDefaults
scoreGeneSet	scoreGeneSet
scoreGeneSet.se	scoreGeneSet.se
scoreGeneSetDefaults	scoreGeneSetDefaults
scoreMarkers	scoreMarkers
scoreMarkers.se	scoreMarkers.se
scoreMarkersDefaults	scoreMarkersDefaults
scrapper	scrapper-package
subsampleByNeighbors	subsampleByNeighbors
subsampleByNeighborsDefaults	subsampleByNeighborsDefaults
subsampleByPartition	subsampleByPartition
subsampleByPartitionDefaults	subsampleByPartitionDefaults
suggestAdtQcThresholds	adt_quality_control
suggestAdtQcThresholdsDefaults	adt_quality_control_defaults
suggestCrisprQcThresholds	crispr_quality_control
suggestCrisprQcThresholdsDefaults	crispr_quality_control_defaults
suggestRnaQcThresholds	rna_quality_control
suggestRnaQcThresholdsDefaults	rna_quality_control_defaults
summarizeEffects	summarizeEffects
summarizeEffectsDefaults	summarizeEffectsDefaults
testEnrichment	testEnrichment
testEnrichmentDefaults	testEnrichmentDefaults
tsnePerplexityToNeighbors	runTsne
type,LogNormalizedMatrixSeed-method	LogNormalizedMatrix
