Interactive construction of stacked barplots using hierarchies

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Documentation for package ‘phylobar’ version 0.99.12

• DESCRIPTION file
• User guides, package vignettes and other documentation
• Package NEWS
• Package README

Help Pages

add_prefix	Add rank prefixes to taxonomic matrix values.
bray_curtis_dist	Bray-Curtis dissimilarity matrix
deseq_normalize	DESeq2 Size Factor Normalization
edgelist_to_phylo	Convert an edge list to an ape phylo object.
node_hierarchy	Construct Initial Hierarchy
node_totals	Compute Node Totals
phylobar	Tree + Stacked Bars
phylobar_data	Prepare tree data for phylobar visualization
subset_cluster	Subsample rows of a matrix using clustering
taxonomy_to_tree	Convert a taxonomic table to an ape phylo object.