Uncertainty-aware quantitative analysis of high-throughput live cell migration data


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Documentation for package ‘cellmig’ version 1.3.4

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cellmig-package cellmig: quantifying cell migration soeed with hierarchical Bayesian models
cellmig Model-based quantification of cell migration speed
d Example dataset 'd'
d_mini Example dataset 'd'
gen_full Simulate data from a fully generative hierarchical Bayesian model
gen_partial Simulate data from a partially generative hierarchical Bayesian model
get_dose_response_profile Visualization of dose-response profiles
get_groups Extract group labels
get_pairs Quantitative and visual comparison of overall treatment effects
get_ppc_means Observed vs. predicted cell migration means in each well
get_ppc_violins Posterior Predictive Checks (PPC) Visualization
get_violins Generate violin plots for treatment group comparisons