augere.de-package       augere.de: Automatic Generation of Differential
                        Expression Analyses
findSubsetGroups        Subset by groups in contrasts
loadExampleDataset      Load example dataset
processContrastMetadata
                        Process contrast metadata
processCustomContrasts
                        Custom contrasts
processCustomDesignMatrix
                        Create a custom design matrix
processSimpleComparisons
                        Contrasts for simple comparisons
processSimpleDesignMatrix
                        Create a simple design matrix
runEdgeR                Differential expression analysis with edgeR
runVoom                 Differential expression analysis with voom
