calculatePvalue         Calculate the significance of the matches for
                        the reference and alternate alleles for their
                        PWM
encodemotif             MotifDb object containing motif information
                        from the known and discovered motifs for the
                        ENCODE TF ChIP-seq datasets
example.results         Example Results from motifbreakR
exportMBbed             Export motifbreakR variants to bed file
exportMBtable           Export motifbreakR results to csv or tsv
factorbook              MotifDb object containing motif information
                        from around the genomic regions bound by 119
                        human transcription factors in Factorbook
findSupportingRemapPeaks
                        Find Corresponding TF Binding From The
                        ReMap2022 Project
hocomoco                MotifDb object containing motif information
                        from Homo Sapiens Comprehensive Model
                        Collection (HOCOMOCO) of transcription factor
                        (TF) binding models
homer                   MotifDb object containing motif information
                        from motif databases included in HOMER
motifbreakR             Predict The Disruptiveness Of Genetic Variants
                        On Transcription Factor Binding Sites
motifbreakR_motif       MotifDb object containing motif information
                        from the motif databases of HOCOMOCO, Homer,
                        FactorBook and ENCODE
plotMB                  Plot a genomic region surrounding a genomic
                        variant, and potentially disrupted motifs
shiny_motifbreakR       Run Shiny version of the motifbreakR package
snps.from.file          Import variants from a BED file or VCF file for
                        use in motifbreakR
snps.from.rsid          Import SNPs from rsid for use in motifbreakR
