calculate_metabolite_centrality
                        Calculate Metabolite Centrality
create_centrality_plot
                        Create Centrality Plot
create_enrichment_plot
                        Create Pathway Enrichment Plot
create_gsea_plot        Create GSEA Plot
create_heatmap_plot     Create Enrichment Heatmap
create_impact_plot      Create Impact vs Significance Plot
create_interaction_plot
                        Create Metabolite Interaction Network
                        (Reactome)
create_membership_plot
                        Create Pathway Membership Plot
create_network_plot     Create Metabolite Pathway Network
da_results_from_se      Convert a SummarizedExperiment to a da_results
                        Object
enrichmet               ENRICHMET: Comprehensive Pathway Analysis for
                        Metabolomics Data
extract_kegg_ids        Extract KEGG compound IDs from pathway data
extract_measured_kegg_ids
                        Extract measured KEGG metabolite IDs from a
                        summary statistics table
fetch_kegg_chebi        Fetch KEGG-ChEBI mappings
fetch_kegg_compound_lookup
                        Fetch KEGG compound names
fetch_kegg_pathway_metabolites
                        Fetch KEGG pathway-metabolite relationships
fetch_kegg_reactome     Build KEGG-Reactome reaction mappings
fetch_lion_lipid_ontology
                        Fetch LION lipid ontology
fetch_reactome_reactions
                        Fetch Reactome reactions
get_cached_file         Download and cache a remote file
perform_enrichment_analysis
                        Perform Pathway Enrichment Analysis
perform_enrichment_analysis_bg
                        Perform pathway enrichment with optional
                        background correction
perform_gsea_analysis   Perform GSEA-style Pathway Enrichment Analysis
prepare_gmt_data        Prepare GMT Data for Pathway Analysis
run_de                  Run Differential Expression Analysis using
                        LIMMA
