SimiCviz-package	SimiCviz
.compute_cell_auc	dot-compute_cell_auc
.ensure_genes_x_cells_format	dot-ensure_genes_x_cells_format
.make_weight_barplot	dot-make_weight_barplot
.plot_weights_paginated	dot-plot_weights_paginated
.subset_auc_for_label	dot-subset_auc_for_label
.weights_to_long	dot-weights_to_long
AUCProcessor	AUCProcessor
AUCProcessor-class	AUCProcessor-class
auc_list_to_df	auc_list_to_df
calculate_activity_scores	calculate_activity_scores
calculate_dissimilarity	calculate_dissimilarity
calculate_ecdf_auc	calculate_ecdf_auc
compute_auc	compute_auc
compute_auc,AUCProcessor-method	compute_auc-AUCProcessor-method
export_SimiCviz_csv	export_SimiCviz_csv
get_auc	get_auc
get_auc,AUCProcessor-method	get_auc-AUCProcessor-method
get_tf_network	get_tf_network
is.SimiCvizExperiment	is.SimiCvizExperiment
load_cell_labels	load_cell_labels
load_collected_auc	load_collected_auc
load_expression_matrix	load_expression_matrix
load_from_csv	load_from_csv
load_SimiCPipeline	load_SimiCPipeline
plot_auc_cumulative	plot_auc_cumulative
plot_auc_distributions	plot_auc_distributions
plot_auc_heatmap	plot_auc_heatmap
plot_auc_summary_statistics	plot_auc_summary_statistics
plot_dissimilarity_heatmap	plot_dissimilarity_heatmap
plot_r2_distribution	plot_r2_distribution
plot_target_weights	plot_target_weights
plot_tf_network_heatmap	plot_tf_network_heatmap
plot_tf_weights	plot_tf_weights
read_auc_csv	read_auc_csv
read_auc_pickle	read_auc_pickle
read_pickle	read_pickle
read_weights_csv	read_weights_csv
read_weights_pickle	read_weights_pickle
setCellLabels	setCellLabels
setLabelNames	setLabelNames
show,AUCProcessor-method	AUCProcessor-class
show,SimiCvizExperiment-method	SimiCvizExperiment-class
SimiCviz	SimiCviz
SimiCvizExperiment	SimiCvizExperiment
SimiCvizExperiment-class	SimiCvizExperiment-class
