Package: BamScale
Type: Package
Title: Bioconductor-Friendly Multithreaded BAM Processing
Version: 0.99.14
Authors@R: c(
    person("Chirag", "Parsania", email = "chirag.parsania@gmail.com", role = c("aut", "cre"))
  )
Description: Multithreaded sequential BAM processing built on top of the
    ompBAM C++ engine. BamScale provides user-friendly BAM read and scan
    interfaces designed for compatibility with existing Bioconductor workflows.
License: MIT + file LICENSE
biocViews: Software, DataImport, Sequencing, Coverage, Alignment,
        QualityControl
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Imports: BiocGenerics, BiocParallel, Biostrings, GenomeInfoDb,
        GenomicAlignments, GenomicRanges, IRanges, methods, ompBAM,
        Rcpp, Rsamtools, S4Vectors
LinkingTo: Rcpp, ompBAM, S4Vectors, IRanges, XVector
Suggests: BiocStyle, chipseqDBData, dplyr, ExperimentHub, ggplot2,
        knitr, readr, rmarkdown, rtracklayer, scales, tibble, testthat
        (>= 3.0.0), tidyr
VignetteBuilder: knitr
Config/testthat/edition: 3
SystemRequirements: C++17, OpenMP
NeedsCompilation: yes
URL: https://cparsania.github.io/BamScale/
BugReports: https://github.com/cparsania/BamScale/issues
Config/roxygen2/version: 8.0.0
git_url: https://git.bioconductor.org/packages/BamScale
git_branch: devel
git_last_commit: 39795de
git_last_commit_date: 2026-08-13
Repository: Bioconductor 3.24
Date/Publication: 2026-08-13
Packaged: 2026-08-13 20:05:34 UTC; biocbuild
Author: Chirag Parsania [aut, cre]
Maintainer: Chirag Parsania <chirag.parsania@gmail.com>
Built: R 4.6.1; x86_64-apple-darwin20; 2026-08-14 05:30:51 UTC; unix
