allele2gene	allele2gene
annotate_heavy_V_alleles	intdata-utils
annotate_light_V_alleles	intdata-utils
augment_germline_db	augment_germline_db
augment_germline_db_D	augment_germline_db
augment_germline_db_J	augment_germline_db
augment_germline_db_V	augment_germline_db
auxdata	auxdata-utils
auxdata-utils	auxdata-utils
auxdata_utils	auxdata-utils
bcr_browser	igbrowser
BLAST_USAGE_REPORT	igblastr_usage_report
compute_auxdata	compute_auxdata
compute_imgt_intdata	compute_V_gene_delineations
compute_V_gene_delineations	compute_V_gene_delineations
download_IMGT_germline_sequences	download_IMGT_germline_sequences
download_OGRDB_germline_json	download_OGRDB_germline_json
download_OGRDB_germline_sequences	download_OGRDB_germline_sequences
download_paired_OAS_units	OAS-utils
extract_codons	translate_codons
extract_metadata_from_OAS_units	OAS-utils
extract_sequences_from_paired_OAS_df	OAS-utils
extract_sequences_from_paired_OAS_units	OAS-utils
fmt7-utils	read_igblastn_fmt7_output
fmt7_utils	read_igblastn_fmt7_output
get_auxdata_path	auxdata-utils
get_igblast_auxiliary_data	auxdata-utils
get_igblast_root	get_igblast_root
get_intdata_path	intdata-utils
has_igblast	igblast_info
igblastn	igblastn
igblastn_help	igblastn
igblastn_version	igblast_info
igblastr_usage_report	igblastr_usage_report
igblast_build	igblast_info
igblast_info	igblast_info
IGBLAST_ROOT	IGBLAST_ROOT
igbrowser	igbrowser
igdata_info	update_live_igdata
IMGT_is_up	download_IMGT_germline_sequences
install_custom_germline_db	install_custom_germline_db
install_igblast	install_igblast
install_IMGT_c_region_db	install_IMGT_germline_db
install_IMGT_germline_db	install_IMGT_germline_db
intdata	intdata-utils
intdata-utils	intdata-utils
intdata_utils	intdata-utils
J_allele_has_stop_codon	auxdata-utils
list_c_region_dbs	list_c_region_dbs
list_germline_dbs	list_germline_dbs
list_igblast_organisms	igblast_info
list_IMGT_organisms	download_IMGT_germline_sequences
list_IMGT_releases	download_IMGT_germline_sequences
list_outfmt7_specifiers	read_igblastn_fmt7_output
list_paired_OAS_studies	OAS-utils
list_paired_OAS_units	OAS-utils
load_auxdata	auxdata-utils
load_c_region_db	use_c_region_db
load_germline_db	use_germline_db
load_igblast_auxiliary_data	auxdata-utils
load_intdata	intdata-utils
makeblastdb_version	igblast_info
makeogrannote	download_OGRDB_germline_json
ndm_data-IO	ndm_data-IO
ndm_data_IO	ndm_data-IO
OAS-utils	OAS-utils
OAS_is_up	OAS-utils
OAS_utils	OAS-utils
outfmt7-utils	read_igblastn_fmt7_output
outfmt7_utils	read_igblastn_fmt7_output
parse_outfmt7	read_igblastn_fmt7_output
print.alignment_summary	read_igblastn_fmt7_output
print.auxdata_md5sum_df	update_live_igdata
print.c_region_dbs_df	list_c_region_dbs
print.fmt7footer	read_igblastn_fmt7_output
print.fmt7record	read_igblastn_fmt7_output
print.germline_dbs_df	list_germline_dbs
print.hit_table	read_igblastn_fmt7_output
print.igblastn_raw_output	igblastn
print.igblast_info	igblast_info
print.igdata_info	update_live_igdata
print.outfmt7_specifiers	read_igblastn_fmt7_output
print.query_details	read_igblastn_fmt7_output
print.subregion_sequence_details	read_igblastn_fmt7_output
print.VDJ_junction_details	read_igblastn_fmt7_output
print.VDJ_rearrangement_summary	read_igblastn_fmt7_output
qseqid	read_igblastn_fmt7_output
qseqid.fmt7record	read_igblastn_fmt7_output
qseqid.query_details	read_igblastn_fmt7_output
read_igblastn_AIRR_output	read_igblastn_AIRR_output
read_igblastn_fmt7_output	read_igblastn_fmt7_output
read_ndm_data	ndm_data-IO
read_OAS_csv	OAS-utils
read_OAS_csv_metadata	OAS-utils
remove_gaps	translate_codons
reset_c_region_dbs	reset_c_region_dbs
reset_germline_dbs	reset_germline_dbs
reset_live_igdata	update_live_igdata
rm_c_region_db	list_c_region_dbs
rm_germline_db	list_germline_dbs
same_ndm_data	ndm_data-IO
set_igblast_root	get_igblast_root
summarizeMismatches	summarizeMismatches
summary.query_details	read_igblastn_fmt7_output
tabulate_deletions	summarizeMismatches
tabulate_insertions	summarizeMismatches
tabulate_mismatches	summarizeMismatches
time_since_live_igdata_last_checked	update_live_igdata
translate_codons	translate_codons
translate_fwr4	auxdata-utils
translate_J_alleles	auxdata-utils
translate_V_alleles	intdata-utils
update_live_igdata	update_live_igdata
Usage_report	igblastr_usage_report
usage_report	igblastr_usage_report
Usage_reporting	igblastr_usage_report
usage_reporting	igblastr_usage_report
use_c_region_db	use_c_region_db
use_germline_db	use_germline_db
validate_ndm_rows	ndm_data-IO
V_allele_has_stop_codon	intdata-utils
V_genes_with_varying_fwrcdr_boundaries	intdata-utils
write_ndm_data	ndm_data-IO
