# Vignettes and other documentation

## Vignettes from package 'DECIPHER'

DECIPHER::ArtOfAlignmentInR |  | The Art of Multiple Sequence Alignment in R | PDF | source | R code
DECIPHER::ClassifySequences |  | Classify Sequences in R | PDF | source | R code
DECIPHER::ClusteringSequences |  | Upsize Your Clustering with Clusterize | PDF | source | R code
DECIPHER::DECIPHERing |  | Getting Started DECIPHERing | PDF | source | R code
DECIPHER::DesignMicroarray |  | Design Microarray Probes in R | PDF | source | R code
DECIPHER::DesignPrimers |  | Design Group-Specific Primers in R | PDF | source | R code
DECIPHER::DesignProbes |  | Design Group-Specific FISH Probes in R | PDF | source | R code
DECIPHER::DesignSignatures |  | Design Primers that Yield Group-Specific Signatures | PDF | source | R code
DECIPHER::FindChimeras |  | Finding Chimeric Sequences in R | PDF | source | R code
DECIPHER::FindingGenes |  | The Magic of Gene Finding | PDF | source | R code
DECIPHER::FindingNonCodingRNAs |  | The Double Life of RNA: Uncovering Non-Coding RNAs | PDF | source | R code
DECIPHER::GrowingTrees |  | Growing Phylogenetic Trees in R with Treeline | PDF | source | R code
DECIPHER::PopulationGenetics |  | Population Genetics Inference in R | PDF | source | R code
DECIPHER::RepeatRepeat |  | Detecting Obscure Tandem Repeats in Sequences | PDF | source | R code
DECIPHER::SearchForResearch |  | Searching Biological Sequences for Research | PDF | source | R code