7e8e2e9853170e9a302123d65ee2aa7f5a1db560611aa5833acd8da132dfd0e4 651 CITATION
771742b07411b02fe0bb5322cb8b5646d3882834601687f76972141546e86c0f 2742 DESCRIPTION
b984dbef8ae7806d0528e2ed8b2a1f41a5c0d33e6490d715e1a0bad7511b0c4d 7135 INDEX
6465e144d17f703d0dd3ac2e1d1fd56cbda82fcb7949983ce5935dc3e971b0e5 3819 Meta/Rd.rds
5a9005f7b11acd635b90c72b5a6dfcbe22956b6f978b8754e05d4a139112cf25 165 Meta/data.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
78371c020e71a37bf7275e076df302ddec9722b6ea0305eaf8f0ea3ed4c7cfcf 3479 Meta/hsearch.rds
2753744536453eb87ffe681fea302ac587fd55798e634b2624f405ec981a2ef4 1899 Meta/links.rds
604d5360cd47939235140ef4ee464e9c6f44695470b2e0457856b19fab81857d 1136 Meta/nsInfo.rds
f3bcac882f740b6763ef5de325c9981811ddb332d2ce656f6775157796d58756 2163 Meta/package.rds
7bde49ace8aa5b56282477ef2e611338bd9dfecc6092a92a56611fc59fa1516a 205 Meta/vignette.rds
6e39f27eec7b08b00b55c4cf977ca20e15aa2a2c63a18ea85b5d6d15a09d769f 3540 NAMESPACE
3c6af9140d1a3d725070425104115c2c1ce11ec8f60d5027b568a8c5a2458de3 14809 NEWS
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/genomation
c72bdb90e5aaccf79342f0db251b8245f0ceaf26e9020cd11c80f51e4c80b7b2 745883 R/genomation.rdb
34897140fc7acd4188dca09603b0e069a05ad1b33194a3c1413c00183d35ce37 3376 R/genomation.rdx
6e7d53ebcdfba17d5f9eb1d535c5494e4b4242fb14beb68b8514ab469824d7e0 2074 README.md
a46cf7d259f6cdac326abc13af69e0ef9dd9c0ea079c9aeed05ccd2bf7200924 18932 data/cage.RData
f1f4c82198993861a4e01c93e3ecce1024400bc74085d55d79c01602067ad8db 3464 data/cpgi.RData
a8fefb7e33f7ba935c8dc86ca89df8175542257984d0879c527c43b7a055cf98 11764 data/genes.RData
aac1b8490b5810fd91db6dd1bfbeb14657a8dded6efb645c6fd7c3b38bc7f7f6 3740 data/promoters.RData
ba9a66cb4e208d939a988b39e0a699cee3e958ecded8914bc466ab77823edba6 12467 doc/GenomationManual.R
b7ee53457a4faa35f39ebad2673a8b7d55eb0ac47ab8a1cc9ac30eb82ba53675 25496 doc/GenomationManual.Rmd
e5889f767cbda8ba92bc955e1a6c8c8523e921200d96b0dc77db3aaadc2adb4a 2977715 doc/GenomationManual.html
0ce7fa6b36c193dc2e66767e60f0d95c799fbb68a2fbd53bbfb2d39ee2629642 1410 doc/index.html
48eb87c9dd9e803be9dfbe5e44d19ac249f32d39e9f1083adcfa5c0af6b11e5f 252 extdata/EnhancersEncode.txt.Test
5675f923e90cda6ff95010e062ec9bc8301c0bb291f8c851b285b04eef9d73d6 262 extdata/Fantom4.Cage.Test
ae8fb2a749893d7b05e39bb6acdf3d1f5073c6b029851b876a56a38645c0cbd9 6625 extdata/chr21.CpGi.hg19.bed
1276cb096d2268451f1c601115fefc315e7156476fbbabab6e9b4238215bfab7 85643 extdata/chr21.refseq.hg19.bed
93a2f5b23170c96fb7739438a2e58857fa4642068327bf006dbee4c0a6c89106 1114370 extdata/chr21.refseq.hg19.gtf
3cac8f1547fe66f53ac5606ad650c86078a1a41ffc4e696adf2ede0c50732cfe 138 extdata/ex.broadPeak
b0ac3d0d855c8f75707599cb38a5785a277c21c158b27a43682dfefe1ef790cb 130 extdata/ex.narrowPeak
e8f98c0b6b3e64af76db4601f134edf8f160806b757c26cefcce8430085ed080 241 extdata/tab1.bed
be627d3da71e8e95581ab123608f8853d32c1d6d71a3620b7b7f93e7fffedae9 206 extdata/tab2.bed
89eaa5cc8a7ab933b1cdb74e80d8a2a3c70bb118efd6a9151850d56addc44e49 206 extdata/tab3.bed
9a26c4390840278d1bda2ea413fae5be787799f00e0945db2798c366798c55f1 39954 genomation_logo.png
e35d8e7f7e18120a10e4ccb42f2f38ae121b62a39f7c5b6e1da133b78ebb6af8 6955 help/AnIndex
ccbce725fc953c6540815cf517689ee3cf829ef3b7e2246c2b73ff8659704623 1540 help/aliases.rds
7841ffbe96ddf9ebd39b8c4421e3319fbcf94f19e92119e9068e3e5a51dae3a3 184441 help/genomation.rdb
750b59c09293e648daf6de3c5cea7db028e195be2f1684cbf41cff5adc629d07 2236 help/genomation.rdx
a6c382c21f4b1cab49d2c01ecddd279e1ee839fbea02eb7171a74e269f8b4eff 1092 help/paths.rds
d387abcfe671cb419314bd942c263ddd75c312d93b3318d9e970d58bda75babb 17370 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
e462254065e34191f3d24495fe37bff56aa9fbd2dfeff72c2170120540bcd6b0 117040 libs/genomation.so
b4262ea0ecda616b613bf5c28f371a2f5c7d5d23021a2e479cc3f86679a81aef 5797 libs/symbols.rds
9813b5803d43bfcc07b7a2d8e1a75eed1c8e049b8626d8e3b5381dd50f41ffdf 34 scripts/FunctionNames.txt
5ba6121087abfe19ba48ef363af6e6f34393c5fa24bffc52794b2d8916d59fab 1428 scripts/devtools_test.R
4a914ec07badfd247c58dfc929ec20d19b42869db47add14ee3d19d870af4d00 1570 scripts/produceDataForExamples.R
641aba5cd28afe460704ff16d139b0460e3ddaf96f5d52179c496b05f69bd34d 36 unitTests/tab.test1
11a4e3cddaba51443109fa6a55dfc8bfac58faa279102072c6c98f9b93fe1e8f 70 unitTests/tab.test2
4dd479c1707c8ee55b22c237be07614a1a0927ebadbe7dcaaabcf8ee92876bb0 70 unitTests/tab.test3
4df028d65813cbbaa905c3fce6dbabb5819ff350fbb30d74bd8b10fe71b728fb 227 unitTests/tab.test3.zip
9bd09699825f8828c6656a7014da16ce5703c350b3f3c9d1bf686d0ee0fc36b5 247 unitTests/tab.test4
426f23800036fdab0a197470a49eec3babded9bf75f54d7533be914652b0a8ef 280 unitTests/test.bam
231d3b79f05b4001376983778294ff5dc129ed6184b5838bd6944eda98874019 176 unitTests/test.bam.bai
4d68dd04b6ba31e3976ccd82729101bae173e74a30a8e364ef50dd37da0e84b8 122 unitTests/test.bedGraph
74e8136b07e11e04517ecff98e62fc9a709fe80613f67a83b449fa178e43accf 74326 unitTests/test.bw
5a56a3496002d9c18352ce98545dc889879be3400a276c6172256d1a9f745a06 829 unitTests/test.gtf
f003c7686c6ccdb175f5490e104e7ef14cded7f87edc46be8571d2053c8b16d3 2222 unitTests/test_PatternMatrix.R
8b9e5770982741045c21f132fc951b469621ae2f47200eb8377a51e6fb1f9885 9873 unitTests/test_ScoreMatrix.R
490d1fdf44f245c167f93089091e1127cbad5051c22b954b1bbf0c5331b61830 10847 unitTests/test_ScoreMatrixBin.R
284070be3f19c2bc897b91fa46d1cd57241366ddbee6768e39c848cbea7894f3 9731 unitTests/test_ScoreMatrixList.R
3c490d0feffe78902c493da67c86a5e453783f066a3f404cd31b0dcab66b8589 1415 unitTests/test_enrichmentMatrix.R
a0ac94eabdb1343d2d8d5c3af80c88d6e32734dfbcaef3f6e3c1968823c4495d 309 unitTests/test_pairedend.bam
f62220556635dd8a9ffe192934cb2cc5a8abcf3fff3e5f1cb7a8aa6491a41337 96 unitTests/test_pairedend.bam.bai
d2cd264c6bfb0c9cc65c4a81337f554bd7c1c79f214d0de49cfcff7f034d5e37 4715 unitTests/test_readData.R
