d1e47226b78581ebe4091f0591f26460d5cb87e380be004bb5658fc055f7c6d0 1894 DESCRIPTION
65afcc09375812d29ccecb6982435b34512452b86bc9a9f5a9844582a626f304 925 INDEX
ae50f37133d8f926757a9aa9971ab2cc64ec6ec9cf17f11defc7e433e4b5b0d7 867 Meta/Rd.rds
4449457512fd14431120867b8fc39e4b8877c72df01172d72a0ac7de3e63b896 105 Meta/data.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
9ff9532df2ed8c16f2dda2ea351b6632d3e3a97070213cb5d586887e9bfc312e 883 Meta/hsearch.rds
176a09e29063f5c11646d7d15c043e272e4089740c4e50b60419a3573e601ea0 403 Meta/links.rds
16e839fbd59f4395ee814942509c7978c1fb3868efa51bbc4a4bde670eb85b01 581 Meta/nsInfo.rds
ec15317b86b5ce5ce15de1b4078d15fc526d6663310dbaa219d15491206778f1 1523 Meta/package.rds
d37284df4540196fb3618198a8df5ac27fe3a17cad777fe480317086088e0f15 263 Meta/vignette.rds
1da4342335bbeae10cfea66e246d376242f516137942fc988e0085375425e4b8 1134 NAMESPACE
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/chipseq
3eec5858b198fe13646835fdf9de81fe0066a8d6aeb6a0f02a17e7fc6dccbc47 66583 R/chipseq.rdb
8a4fb8323a6a237816c827400dee772abaf71813dff481f1e20e0d7c0a1ca2ee 1044 R/chipseq.rdx
0618f21f9c7010d88db6f42eb99942943aeb769908e2506fe08b4d8028328233 28144 Scripts/AntibodyComparison.Rnw
86866b52a7b164a1ba02615aa8fe1371cfa4a16c60e88ae97cc8a7f898d345f1 7870 Scripts/CTCFBindingSites.R
68083b14bc8b9bf1ee1f27fac2cfe0279db15dba5f385471d7115ed58bb07a0c 4202 Scripts/CTCF_ERV.R
4e8e6552a1ed74f6c62d1c1140b46416416e37d527b9b5d748c47fb405ea0fed 546 Scripts/CopyNumber.Rnw
b33cf264a743f6f9e86ee7a112a51dfbddf0f2b1e2a2e6baf3349c6e68b866ad 10691 Scripts/Islands.Rnw
07029ec6aa67135222d5628585d08d7ced95daf93bc8422d326f2616924b874a 3303 Scripts/MyoD.R
b603c6f3e65dd77a2f5d140b7210ced1dc9d76f8b51f53b3823a901e3ebfb366 5470 Scripts/PairedEndComparison.Rnw
d0d31481abc54ac9f8e9e738035bff3e5459567665fe02a1f8c02270396af144 6308 Scripts/PeakContextHuman.Rnw
91cabcdef9510b68d7aa949e1d9434a0747dde168ad969f150d7a38141622702 6040 Scripts/PeakContextMouse.Rnw
d15bc0dc4a2e4c042b9fc66962e6d12ccf37af4a294c4562c132d9ce67486723 7647 Scripts/PeakCutoff.Rnw
91e4b4dad5e604478c4d2ad58372a434d6be4dfca68143f920b1cb4f2db866b3 15068 Scripts/PeakModel.Rnw
294eb1361de2456f9f283f92411e07ed65276a458ba5b282e3ae2272a7c29cc7 20080 Scripts/PeakReproducibility.Rnw
483139c0b9d8f2e0e38961e1288c6afa5cf4fc2497feb72ca8b29711feeba10e 4480 Scripts/PeaksByCopyNumber.Rnw
b746eabd2b8e806e0c967af50e2ee5292c46f06f1f2f61a745517b1d927e8300 14331 Scripts/RateComparison.Rnw
8a15e11e87ee67eea940d0d29f106a4cf49551278c89dbad2525ed9f44b6bfbb 2807 Scripts/ReadAndSave54.R
3a8d884749ac2d07e3c32b8dd9be3d595a791b361627abd9e5c22dc5abc7d83b 3256 Scripts/ReadAndSaveCTCF.R
6f30b4f6d1346c9230e12141d7e17a8c8b6a447756834283ff7aed3313c06640 5586 Scripts/ReadAndSaveData.R
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5af5421b75b118050ce1e67a0a3cbe83b3bb9cf7ec81f8d43df9e7f72864895a 406 Scripts/SolexaSim.R
dc4ef309873fb10d97b5dba0cd1ac2ab29bd7a5d49711ed05aef36702f31ba38 7290 Scripts/abc.rda
4936a0dadb5056ea010929b8d4d3a27f8c90d6eac3d2f158be085abcb50a804e 7941 Scripts/antibody_comparison.R
b3eb1382bde94626f15d485696362ef15336bf256b0656d70cfd7378b495dfd0 5188 Scripts/dePeaks.R
070a6a879f41e55f8d3a7abfca597c24226f1c142a8f6542089630d61cb25066 14180 Scripts/diffpeak.R
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2f5b810fabbd2202e16e727504e9cfdc94843fec2d1aba18fc6a9ea1208c8053 15482 Scripts/estimate_fragment_size.R
e14f192a8c7c3af0a7aeb8d93acbf8eed301e39070ee2baeaa1f1e8ba69f538c 12089 Scripts/fibroblasts.R
b0431e1a59805b0f5909b41885f757afd4fd56ff6efb57ebb7643159fdc30f42 932 Scripts/getIsochores.R
74fe67275534af1c7f887fa8e8c99737b14749acecc20cb5aed190a130215d17 6672 Scripts/hmm.R
c3874b4894f40e4a793c7cac0df6fd6d0e05889dd90024b2309410691f2d7883 2231 Scripts/human-islands.R
2f8295a6ec84d6ca382202787f5a5329dfde12ab82284fe090d3401ca2b7a45f 5450 Scripts/isochore_comparison.R
ce6d7efde46070ad9433448e385e93bb02be43956ed7d4ce63b4d5cf6ab1221f 404051 Scripts/isochores.mm9.rda
bcf1d337b4ee83efb51b9b4642d3c9ffbbcc4779c35b4f544a3c0556fc94a69c 4009 Scripts/negbinomial.R
d94a9fb5c3e8294a7d3f6a7ae2a07fa88410f9f87cfc38c2ed2ebefb7c0bfa8a 3042 Scripts/peakContext.R
5eebf176fdfc229020be789fe3743d3645311e37e9157d7372ed9cdadf720343 5355 Scripts/peak_mle.R
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424925b2b92e986ebace791807f389fcfb9f3eaf8f3351c254fb7afc3b93db58 3045 Scripts/simulate.R
e92a0d0f7210c0adb9c69cbf35354b20ea3f8607ed3a3931f7c1f25630885d24 18898 Scripts/singletons.Rnw
3dc18d879f915233138e2291a80d6089a7f41854490d839e10f53f7b4010d539 6952 Scripts/solexa54.R
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f4ccc9688a397cd333aa0fb38287f342549ca3bb199f208125db31df41d571ce 7 data/datalist
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fc31e8debe3c341e03ffe523c2594d4751b65575cd61e20fa4b43865d88ad80e 806 help/AnIndex
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6a8af62173db621983c7a94901e610174fcfe9ae34e9364a3531de13ecd80b5c 26967 help/chipseq.rdb
5dc88877126a93d0b2cae646f2ee8a94ac9a610a69cb8125b99776f4936444f6 418 help/chipseq.rdx
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51d7a776e1d5d84db9de8e730c8cdb20fe163f4b97f851b6cb41b021d9f7b2e7 4740 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
2ed6571fab0f4b954cf335019efe6f37539ad1ff8ad0b328e260dcf00f141349 17272 libs/chipseq.so
b66d1dc22b7fda3d36315efe2f562be716869c94031cceff5714db0011c5e87b 293 libs/symbols.rds
