3d4c36f817e3895d2c064337ad66b4657326b24540c737f0888b0089b67d1e99 863 CITATION
dfb2be595f27603955142b89c69ca5bcb2a969e679cdf7016205a35a5ca28b0c 2876 DESCRIPTION
a65a6f8deeb25616823af88b3a96d110eb4a8fb0085b817d0e5c30ed7adc1970 10716 INDEX
b6e34e847ddb42426b95444e978e4f519a5cdd51f1a1ca4cd62625b7a7b6dfa7 4448 Meta/Rd.rds
2c62207db108ab66be635ab49e48c1ed6b4d18ca670d045a0577b5e83bb2f98f 220 Meta/data.rds
04abba1fbf14e9ebfa5018fd8a740842010982b85aad6aef0f672275b088d982 122 Meta/features.rds
58245d37b631fb1cc00d5ca4895eb4d8fba59ef36b185ea7ec6a037c22fd72c3 3873 Meta/hsearch.rds
a9bd756ba6f2e5b500b835c5661cf5881cab422154887a9926c2fa80da224152 1652 Meta/links.rds
9c82ffc60d9a169c111942a87637df2626590fceea6f83f9ed5a31397d876833 1078 Meta/nsInfo.rds
0035446af0065054864b6416267068943327256798eca7b708c93e79752c3bb1 2266 Meta/package.rds
ea84f759485cb240be03ae9d917422010a800b029988181e88f6b5bad1181e07 378 Meta/vignette.rds
5da2b971e9aefa045ee109ee914d69082dd5cccccfa87060e475b6779b42864b 2554 NAMESPACE
a5019d5e38ff0c824aa7f3dbda8b13a815f2cbb9f25685cbf9df876743e2444b 521 NEWS.md
570ca456b280cdeb201ef5ebdf22dc8f80092e2c0c68e33c7f73340e420f3759 1058 R/PRONE
17ef21cd0ce8c8eceb88b293fdb2b02b4de5b06e925893a81bd2a1746cab0825 285521 R/PRONE.rdb
c2d47a5f65ee506aca1dbaa1a9ddc23f2373c3c1c2a80583177ee3c3c749a6f7 2000 R/PRONE.rdx
528edca606a82953f050ac1d66970575eb6bb85642f59a4e15817fb14a7f710b 4661 README.md
8330699ca881cd79dbfbc39e9ce43ddb2910c7167c7acb9787834ab1c1a95901 141536 data/spike_in_de_res.rda
5749a420ff43ec848ec3c1778c99c94e6537853dd3a7e86ed6b722a0fdc9c14d 345092 data/spike_in_se.rda
3c05ff2425b83512309b309beea7c3a414af53517f2aa1877ab6715a2b00a0fc 141492 data/tuberculosis_TMT_de_res.rda
341343a25289efb79255cd04e80fb30c5213f3c13e7fb3f45f1620713caae9be 223140 data/tuberculosis_TMT_se.rda
2ca0a38794df69326cb5b942bff09d7da3ff045f68b19f7444a54a02c7cb1317 5621 doc/Differential_Expression.R
71081ef19f3e776959ad8b3c8517716bfde66a77141f8a7c7ec38eebb45ec9c3 14828 doc/Differential_Expression.Rmd
5372f54eaf3908467a0ba668e7eb8e2a964c814b5032a890f9e0d86f82baaf25 1295483 doc/Differential_Expression.html
3924ca3c333a2752263549cfecc37f905081235e65d8076ef9fc569f7ac3ab0e 814 doc/Imputation.R
849aa232ae8f93d15f4f26c9dc9d53dd265c5ff6c4c9f76eea6218397ab7ec36 3402 doc/Imputation.Rmd
078568b8be2edf2209a71735a4519a218d2ff5e921921e9f8318ddebf55863e0 21999 doc/Imputation.html
1adcf0ac8b775732eb7251b56f2c2b80997b254df7bda3ccde40eedde97fe80d 5824 doc/Normalization.R
3cc86b020608936c8d346761f0d3fa8db948325cb537734324d46ffa44957548 13024 doc/Normalization.Rmd
a840ac827296f4de346ecb47b5b63a6636fb8e95a26b83a88977319689c898ed 2131594 doc/Normalization.html
1f5c371d1af45a2e0772235b05826a114591d2e62909b6cae2ea72f26c42c55b 2588 doc/PRONE.R
6136dc524a9f6d116313fe9e04335d4a8068118c09072d7877f3b76b4f006812 9497 doc/PRONE.Rmd
2824c2f64c2a1dbe361899d349636deb207edcf9a2fbb55a48ae42c47ae59387 1918754 doc/PRONE.html
bdf40f854e98d2dec072cfdcd895dcf0153c0a00616ff6a13c305f7ec5305925 5798 doc/Preprocessing.R
af214ae6d7b88b05f671ba99b1f660557e1ac7ef19ba0a3908c7b7621448fe0f 10726 doc/Preprocessing.Rmd
2be0f5feadfeb08f305022168445d38f340562cccd34c1966e95c960706a8373 1170401 doc/Preprocessing.html
a202f538157458a980f02d0ca24354b5b9ee17425e5ea078a5c5f8f9feca9e26 7814 doc/Spike_In_Data.R
67dd1a00c6111a95c893e88e0e3b4cbd69011e7a3f6b8328b15f3742f5018878 14698 doc/Spike_In_Data.Rmd
b659fc4bb0c9a098fbecfdef3276af6735c9414e2934d9d6988965ed1f888dc2 1477036 doc/Spike_In_Data.html
a0f3a32a6ceb75ff30379751310210db5e69201a9ca1332c62c2776d1f15c27d 3586 doc/index.html
a7d9f8839eb931e1b715589ad52217c4696e29ac1e6355922afb0ddd653809eb 302 extdata/Ecoli_human_MaxLFQ_metadata.csv
0ba524ad7912685ba6e851b3466d69a481bbae0259008b6d2da0ad0ad490cb97 270612 extdata/Ecoli_human_MaxLFQ_protein_intensities.csv
b558168f16aaf08cf7f4583ba89d593e61c42edb98d812e11acc33cf1ab10b31 314 extdata/mouse_liver_cytochrome_P450_metadata.csv
eec4be9a23bdb727abcf9de578cd3029362a30ed647e2f8bc656e83cfd7ee8c7 184656 extdata/mouse_liver_cytochrome_P450_protein_intensities.csv
0b5100184d588a797cc57eee479bf72462a488c8ceec8d69af6d9555416c8810 1646 extdata/tuberculosis_metadata.csv
a5460427acf5a67f88b33f407cf4f7a6583a957a49c569f91b3ae93c090cc653 317638 extdata/tuberculosis_protein_intensities.csv
6c8fae1ed38f39b97b718c4f81c23bffa87d6861d18354f1b014fd4c0eb3b7ad 3864 help/AnIndex
3099ba6f6064856afe0524a83900e0849909b686bbb957dc87e483c0c4db7f34 187774 help/PRONE.rdb
20b5ed9274bedadc18f95b3f08637aa6dea52c328dc60d91e878fb42a81cb8e4 2614 help/PRONE.rdx
175254de5f0d41fcea73ef9df095cc5f804dd3092da7ff3109bbb112a55a9310 1045 help/aliases.rds
e46d99c4c859b87d4b3f267c54f5f5a44e66aff08c36dbe1768918939ed5a091 234673 help/figures/PRONE_package_logo.png
5c0cb718533ff2566d39c32d41484bbd2bfe304fe8a23cdaff769b28aab79991 1412366 help/figures/Workflow_PRONE.png
e7062a9661b2a74d11e4bcee5d6a713d153d9f3d7583854e153e78b69b545f8b 123937 help/figures/logo_PRONE.png
975f8f4164ab2521262364ce6adff8726fd4e00da4d4dfba2fbbf279e6be0567 1261 help/paths.rds
65dd50b44056462bcd2d13fbb67726257c6c28d59ae7ed78d696012c4bee2c1e 16619 html/00Index.html
3d290675266eebeba6efff07db879d699843c80bf428f9e71000e2fc6078f5db 2133 html/R.css
04089a8ba8ed9797d585f961b9d2b249b17701ea08fac61836a7947dde7065d9 4205 script/Data.R
