# Efficient Gene Set Enrichment Analysis for DNA Methylation Data

## Documentation for package ‘dmGsea’ version 1.0.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

dmGsea | Efficient Gene Set Enrichment Analysis for DNA Methylation Data
geneID2geneName | Extract gene names for given entrezids
getGO | Extract GO pathway gene set
getIlluminaAnnotation | Extract CpG-Gene corresponding table from Illuminal annotation file.
getKEGG | Extract KEGG pathway gene set
getMSigDB | Extract MsigDB pathway gene set
getReactome | Extract Reactome pathway gene set
gsGene | Gene set enrichment analysis based on gene level combined test P values
gsPG | Gene set enrichment analysis based on combined probe group P values
gsProbe | Gene set enrichment analysis based on probe level P values
gsRank | Gene set enrichment analysis based on gene level P values