OpenAccess TCGA Data on Terra as MultiAssayExperiment


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Documentation for package ‘terraTCGAdata’ version 1.12.0

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getAssayData Obtain assay datasets from Terra
getAssayTable Obtain a reference table for assay data in the Terra data model
getClinical Obtain clinical data
getClinicalTable Obtain the reference table for clinical data
getTCGAdatalist Import Terra TCGA data as a list
sampleTypesTable Get an overview of the samples available in the workspace
selectTCGAworkspace Obtain or set the Terra Workspace Project Dataset
terraTCGAdata Obtain a MultiAssayExperiment from the Terra workspace
terraTCGAworkspace Obtain or set the Terra Workspace Project Dataset