| hg19_cytoband |
A dataframe containing cytoband annotation details extracted from the hg19 gennome. It is used for CNV frequency visualization. |
| hg38_cytoband |
A dataframe containing cytoband annotation details extracted from the hg38 gennome. It is used for CNV frequency visualization. |
| pgxFreqplot |
Plot CNV frequency data |
| pgxLoader |
Load data from Progenetix database via the Beacon v2 API with some extensions |
| pgxMetaplot |
Plot survival data of individuals |
| pgxSegprocess |
Extract, analyse and visualize "pgxseg" files |
| segtoFreq |
Calculate CNV frequency data from given segment data |
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