Downloads ENA Fastqs With GEO Accessions
![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
Documentation for package ‘GEOfastq’ version 1.16.0
Help Pages
| crawl_gse | Get GSE text from GEO |
| crawl_gsms | Crawls SRX pages for each GSM to get metadata. |
| extract_gsms | Extract GSMs needed to download RNA-seq data for a series |
| get_dldir | Gets part of path to download bulk RNAseq sample from EBI or NCBI |
| get_fastqs | Download and RNA-seq fastq data from EBI |