| checkSNV |
Check the validity of SNVs |
| filterSNVImpact |
Filter SNV Impact GRanges Object Based on User-Defined Thresholds |
| G4HunterDetect |
Detect G4 Sequences Using G4Hunter Algorithm |
| G4HunterScore |
Calculate the G4Hunter Score for a Given Sequence |
| loadSequence |
Load Genome Sequences |
| plotG4Info |
Plot Basic Statistics of G4s Detected by the G4HunterDetect Function |
| plotImpactSeq |
Visualize the variants in G4 sequence |
| plotSNVImpact |
Plot the Impact of SNVs on G4Hunter Scores |
| snp_gr |
Single Nucleotide Polymorphisms GRanges Object |
| SNVImpactG4 |
Evaluate the Impact of SNVs on G4 Sequences |
| snv_gr |
Single Nucleotide Variant GRanges Object |
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