Package: rcellminer
Type: Package
Title: rcellminer: Molecular Profiles, Drug Response, and Chemical
        Structures for the NCI-60 Cell Lines
Version: 2.29.0
Date: 2021-07-27
Author: Augustin Luna, Vinodh Rajapakse, Fabricio Sousa
Maintainer: Augustin Luna <augustin.luna@nih.gov>, Vinodh Rajapakse
 <vinodh.rajapakse@nih.gov>, Fathi Elloumi <fathi.elloumi@nih.gov>
Description: The NCI-60 cancer cell line panel has been used over the course of
    several decades as an anti-cancer drug screen. This panel was developed as part
    of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/) of the
    U.S. National Cancer Institute (NCI). Thousands of compounds have been tested
    on the NCI-60, which have been extensively characterized by many platforms for
    gene and protein expression, copy number, mutation, and others (Reinhold, et
    al., 2012). The purpose of the CellMiner project (http://discover.nci.nih.gov/
    cellminer) has been to integrate data from multiple platforms used to analyze
    the NCI-60 and to provide a powerful suite of tools for exploration of NCI-60
    data.
License: LGPL-3 + file LICENSE
LazyData: true
Imports: stringr, gplots, ggplot2, methods, stats, utils, shiny
Depends: R (>= 3.2), Biobase, rcellminerData (>= 2.0.0)
Suggests: knitr, RColorBrewer, sqldf, BiocGenerics, testthat,
        BiocStyle, jsonlite, heatmaply, glmnet, foreach, doSNOW,
        parallel, rmarkdown
URL: http://discover.nci.nih.gov/cellminer/
VignetteBuilder: knitr
biocViews: aCGH, CellBasedAssays, CopyNumberVariation, GeneExpression,
        Pharmacogenomics, Pharmacogenetics, miRNA, Cheminformatics,
        Visualization, Software, SystemsBiology
RoxygenNote: 7.1.1
Encoding: UTF-8
git_url: https://git.bioconductor.org/packages/rcellminer
git_branch: devel
git_last_commit: 6866a6f
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.21
Date/Publication: 2024-11-25
NeedsCompilation: no
Packaged: 2024-11-25 22:21:53 UTC; biocbuild
Built: R 4.5.0; ; 2024-11-26 12:42:17 UTC; unix
