Visualization Tool for GWAS Result
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Documentation for package ‘ggmanh’ version 1.12.0
Help Pages
| binned_manhattan_plot | Plot Binned Manhattan Plot |
| binned_manhattan_plot-method | Plot Binned Manhattan Plot |
| binned_manhattan_plot.data.frame | Plot Binned Manhattan Plot |
| binned_manhattan_plot.default | Plot Binned Manhattan Plot |
| binned_manhattan_plot.MPdataBinned | Plot Binned Manhattan Plot |
| binned_manhattan_preprocess | Preprocess GWAS Result for Binned Manhattan Plot |
| binned_manhattan_preprocess-method | Preprocess GWAS Result for Binned Manhattan Plot |
| binned_manhattan_preprocess.data.frame | Preprocess GWAS Result for Binned Manhattan Plot |
| binned_manhattan_preprocess.default | Preprocess GWAS Result for Binned Manhattan Plot |
| binned_manhattan_preprocess.MPdata | Preprocess GWAS Result for Binned Manhattan Plot |
| calc_new_pos | Calculate new x-position of each point |
| default_gds_path | Path to Default GDS File |
| gds_annotate | Annotation with GDS File |
| ggmanh | ggmanh: A package for visualization of GWAS results. |
| ggmanh_annotation_gds | gnomAD Variant Annotation in SeqArray Format |
| manhattan_data_preprocess | Preprocess GWAS Result |
| manhattan_data_preprocess-method | Preprocess GWAS Result |
| manhattan_data_preprocess.data.frame | Preprocess GWAS Result |
| manhattan_data_preprocess.default | Preprocess GWAS Result |
| manhattan_plot | Manhattan Plotting |
| manhattan_plot-method | Manhattan Plotting |
| manhattan_plot.data.frame | Manhattan Plotting |
| manhattan_plot.default | Manhattan Plotting |
| manhattan_plot.MPdata | Manhattan Plotting |
| qqunif | Plot Quantile-Quantile Plot of p-values against uniform distribution. |
| thinPoints | Thin Data Points |