Package: gg4way
Title: 4way Plots of Differential Expression
Version: 1.5.0
Authors@R: c(
    person(given = c("Benjamin", "I"),
           family = "Laufer",
           role = c("aut", "cre"),
           email = "blaufer@gmail.com"),
    person(given = c("Brad", "A"),
           family = "Friedman",
           role = c("aut")))
Description: 4way plots enable a comparison of the logFC values from two contrasts of differential gene expression. The gg4way package creates 4way plots using the ggplot2 framework and supports popular Bioconductor objects. The package also provides information about the correlation between contrasts and significant genes of interest.
License: MIT + file LICENSE
URL: https://github.com/ben-laufer/gg4way
BugReports: https://github.com/ben-laufer/gg4way/issues
biocViews: Software, Visualization, DifferentialExpression,
        GeneExpression, Transcription, RNASeq, SingleCell, Sequencing
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.3.0), ggplot2
Imports: DESeq2, dplyr, edgeR, ggrepel, glue, janitor, limma, magrittr,
        methods, purrr, rlang, scales, stats, stringr, tibble, tidyr
Suggests: airway, BiocStyle, knitr, org.Hs.eg.db, rmarkdown, testthat,
        vdiffr
VignetteBuilder: knitr
Config/testthat/edition: 3
LazyData: false
git_url: https://git.bioconductor.org/packages/gg4way
git_branch: devel
git_last_commit: b67ad3a
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.21
Date/Publication: 2025-03-05
NeedsCompilation: no
Packaged: 2025-03-05 21:32:41 UTC; biocbuild
Author: Benjamin I Laufer [aut, cre],
  Brad A Friedman [aut]
Maintainer: Benjamin I Laufer <blaufer@gmail.com>
Built: R 4.5.0; ; 2025-03-06 03:21:54 UTC; unix
