# Cell Signalling Using Single Cell RNAseq Data Analysis

## Documentation for package ‘SingleCellSignalR’ version 1.19.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

cell_classifier | Cell classifier
cell_signaling | Cell Signaling
clustering | Clustering
cluster_analysis | Cluster Analysis
data_prepare | Data Prepare
example_dataset | Example dataset
expression_plot | Expression Plot
expression_plot_2 | Expression Plot 2
inter_network | inter network
intra_network | intra network
LRdb | Ligand/Receptor interactions data table
LRscore | Calculation of the LRscore
markers | Markers
markers_default | A list of cell types markers
mm2Hs | Mus Musculus (mm) to Homo Sapiense (Hs) Orthology table
mv_interactions | most variable interactions
PwC_ReactomeKEGG | Pathway Commons Reactome KEGG 2019-05-08
simplify_interactions | simplify_interactions
visualize_interactions | Visualize interactions