AllGeneSymbols	AllGeneSymbols
annotationListToMatrix	gene2set
clEnrich	clEnrich
clEnrich_one	clEnrich_one
clusterMethods	clusterMethods
clusterMethods,cogena-method	clusterMethods
clusterMethods,cogena_methods	clusterMethods
clusterMethods,genecl-method	clusterMethods
clusterMethods,genecl_methods	clusterMethods
coExp	coExp
cogean_package	cogena_package
cogena	cogena_package
cogena-class	cogena_class
cogena_package	cogena_package
corInCluster	corInCluster
corInCluster,cogena-method	corInCluster
corInCluster,cogena_methods	corInCluster
DEexprs	DEexprs
enrichment	enrichment
enrichment,cogena-method	enrichment
enrichment,cogena_methods	enrichment
gene2set	gene2set
genecl-class	genecl_class
geneclusters	geneclusters
geneclusters,cogena-method	geneclusters
geneclusters,cogena_methods	geneclusters
geneclusters,genecl-method	geneclusters
geneclusters,genecl_methods	geneclusters
geneExpInCluster	geneExpInCluster
geneExpInCluster,cogena-method	geneExpInCluster
geneExpInCluster,cogena_methods	geneExpInCluster
geneInCluster	geneInCluster
geneInCluster,cogena-method	geneInCluster
geneInCluster,cogena_methods,cluster_methods	geneInCluster
gmt2list	gmt2list
gmtlist2file	gmtlist2file
heatmap.3	heatmap.3
heatmapCluster	heatmapCluster
heatmapCluster,cogena-method	heatmapCluster
heatmapCmap	heatmapCmap
heatmapCmap,cogena	heatmapCmap
heatmapCmap,cogena-method	heatmapCmap
heatmapPEI	heatmapPEI
heatmapPEI,cogena	heatmapPEI
heatmapPEI,cogena-method	heatmapPEI
logfc	upDownGene
logfc,	upDownGene
mat	mat
mat,cogena-method	mat
mat,cogena_methods	mat
mat,genecl-method	mat
mat,genecl_methods	mat
nClusters	nClusters
nClusters,cogena-method	nClusters
nClusters,cogena_methods	nClusters
nClusters,genecl-method	nClusters
nClusters,genecl_methods	nClusters
pClusters	pClusters
PEI	PEI
plot.sota	sota
print.sota	sota
Psoriasis	Psoriasis
Psoriasis,DEexprs,sampleLabel,cogena_result	Psoriasis
sampleLabel	sampleLabel
show,cogena-method	show
show,cogena_methods	show
show,genecl-method	show
sota	sota
summary,cogena-method	summary
summary,cogena_methods	summary
summary,genecl-method	summary
upDownGene	upDownGene
upDownGene,cogena	upDownGene
upDownGene,cogena-method	upDownGene
