Package: kmcut
Type: Package
Title: Optimized Kaplan Meier analysis and identification and
        validation of prognostic biomarkers
Version: 1.0.0
Authors@R: c(person(given = "Igor", family =  "Kuznetsov", role = c("aut", "cre"), email = "ibkalb@gmail.com"), person(given = "Javed", family = "Khan", role = "aut", email = "khanjav@mail.nih.gov")) 
Description: The purpose of the package is to identify prognostic biomarkers and an optimal numeric cutoff for each biomarker that can be used to stratify a group of test subjects (samples) into two sub-groups with significantly different survival (better vs. worse). The package was developed for the analysis of gene expression data, such as RNA-seq. However, it can be used with any quantitative variable that has a sufficiently large proportion of unique values.
License: Artistic-2.0
Encoding: UTF-8
Imports: survival, tools, methods, pracma, doParallel, foreach,
        parallel, SummarizedExperiment, S4Vectors
RoxygenNote: 7.2.3
Suggests: BiocStyle, knitr, rmarkdown,
VignetteBuilder: knitr
biocViews: Software, StatisticalMethod, GeneExpression, Survival
git_url: https://git.bioconductor.org/packages/kmcut
git_branch: RELEASE_3_20
git_last_commit: 65a5651
git_last_commit_date: 2024-10-29
Repository: Bioconductor 3.20
Date/Publication: 2024-11-08
NeedsCompilation: no
Packaged: 2024-11-08 22:52:33 UTC; biocbuild
Author: Igor Kuznetsov [aut, cre],
  Javed Khan [aut]
Maintainer: Igor Kuznetsov <ibkalb@gmail.com>
Built: R 4.4.1; ; 2024-11-09 21:55:51 UTC; unix
