# Outlier Gene Set Analysis

## Documentation for package ‘OGSA’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

OGSA-package | This package uses outlier statistics and gene set analysis to identify deregulated pathways.
cnv | Copy number variation data
copaInt | copaInt
copaIntE | copaIntE
copaStat | copaStat
expr | expr
meth | meth
OGSA | This package uses outlier statistics and gene set analysis to identify deregulated pathways.
outCallRank | outCallRank
outCallRankE | outCallRankE
outCallTib | outCallTib
outCallTibE | outCallTibE
outCount | outCount
outMap | outMap
outRank | outRank
pathGS | Gene set defined by BioCarta pathway
pheno | pheno
testGScogps | testGScogps