# Low Dimensions projection of cytometry samples

## Documentation for package ‘CytoMDS’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

channelSummaryStats | Summary statistics per channel computation
computeMetricMDS | metric MDS projection of sample
eigenVals | MDS class
EMDDist | Calculate Earth Mover's distance between two flowFrames
ggplotMarginalDensities | Plot of channel intensity marginal densities
ggplotSampleMDS | Plot of Metric MDS object
ggplotSampleMDSShepard | Plot of Metric MDS object - Shepard diagram
ggplotSampleMDSWrapBiplots | SampleMDS biplot wrapping
GoF | MDS class
MDS-class | MDS class
nDim | MDS class
nPoints | MDS class
pairwiseEMDDist | Pairwise Earth Mover's Distance calculation
pctvar | MDS class
projDist | MDS class
projections | MDS class
pwDist | MDS class
RSq | MDS class
RSqVec | MDS class
show-method | MDS class
smacofRes | MDS class
spp | MDS class
stress | MDS class