activeFilter	global-filters
activeFilter,EnsDb-method	global-filters
addFilter	global-filters
addFilter,EnsDb-method	global-filters
cdsBy	EnsDb-exonsBy
cdsBy,EnsDb-method	EnsDb-exonsBy
cdsToTranscript	cdsToTranscript
columns,EnsDb-method	EnsDb-AnnotationDbi
convertFilter,AnnotationFilter,EnsDb-method	convertFilter
convertFilter,AnnotationFilterList,EnsDb-method	convertFilter
dbconn	EnsDb-class
dbconn,EnsDb-method	EnsDb-class
Deprecated	Deprecated
dropFilter	global-filters
dropFilter,EnsDb-method	global-filters
EnsDb	EnsDb
EnsDb-class	EnsDb-class
ensDbFromAH	makeEnsemblDbPackage
ensDbFromGff	makeEnsemblDbPackage
ensDbFromGRanges	makeEnsemblDbPackage
ensDbFromGtf	makeEnsemblDbPackage
ensembldb-deprecated	Deprecated
ensemblVersion	EnsDb-class
ensemblVersion,EnsDb-method	EnsDb-class
EntrezidFilter	Deprecated
ExonidFilter	Deprecated
ExonrankFilter	Deprecated
exons	EnsDb-exonsBy
exons,EnsDb-method	EnsDb-exonsBy
exonsBy	EnsDb-exonsBy
exonsBy,EnsDb-method	EnsDb-exonsBy
exonsByOverlaps,EnsDb-method	EnsDb-exonsBy
fetchTablesFromEnsembl	makeEnsemblDbPackage
filter	global-filters
Filter-classes	Filter-classes
fiveUTRsByTranscript,EnsDb-method	EnsDb-exonsBy
GenebiotypeFilter	Deprecated
GeneidFilter	Deprecated
genes	EnsDb-exonsBy
genes,EnsDb-method	EnsDb-exonsBy
genomeToProtein	genomeToProtein
genomeToTranscript	genomeToTranscript
getGeneRegionTrackForGviz	EnsDb-utils
getGeneRegionTrackForGviz,EnsDb-method	EnsDb-utils
getGenomeFaFile	EnsDb-sequences
getGenomeFaFile,EnsDb-method	EnsDb-sequences
getGenomeTwoBitFile	EnsDb-sequences
getGenomeTwoBitFile,EnsDb-method	EnsDb-sequences
hasProteinData	hasProteinData-EnsDb-method
hasProteinData,EnsDb-method	hasProteinData-EnsDb-method
intronsByTranscript,EnsDb-method	EnsDb-exonsBy
keys,EnsDb-method	EnsDb-AnnotationDbi
keytypes,EnsDb-method	EnsDb-AnnotationDbi
lengthOf	EnsDb-lengths
lengthOf,EnsDb-method	EnsDb-lengths
lengthOf,GRangesList-method	EnsDb-lengths
listColumns	EnsDb-class
listColumns,EnsDb-method	EnsDb-class
listEnsDbs	listEnsDbs
listGenebiotypes	EnsDb-class
listGenebiotypes,EnsDb-method	EnsDb-class
listProteinColumns	ProteinFunctionality
listTables	EnsDb-class
listTables,EnsDb-method	EnsDb-class
listTxbiotypes	EnsDb-class
listTxbiotypes,EnsDb-method	EnsDb-class
listUniprotDbs	ProteinFunctionality
listUniprotDbs,EnsDb-method	ProteinFunctionality
listUniprotMappingTypes	ProteinFunctionality
listUniprotMappingTypes,EnsDb-method	ProteinFunctionality
makeEnsembldbPackage	makeEnsemblDbPackage
makeEnsemblSQLiteFromTables	makeEnsemblDbPackage
mapIds,EnsDb-method	EnsDb-AnnotationDbi
metadata	EnsDb-class
metadata,EnsDb-method	EnsDb-class
OnlyCodingTxFilter	Filter-classes
OnlyCodingTxFilter-class	Filter-classes
organism	EnsDb-class
organism,EnsDb-method	EnsDb-class
promoters	EnsDb-exonsBy
promoters,EnsDb-method	EnsDb-exonsBy
ProtDomIdFilter	Filter-classes
ProtDomIdFilter-class	Filter-classes
ProteinDomainIdFilter	Filter-classes
ProteinDomainIdFilter-class	Filter-classes
ProteinDomainSourceFilter	Filter-classes
ProteinDomainSourceFilter-class	Filter-classes
proteins	ProteinFunctionality
proteins,EnsDb-method	ProteinFunctionality
proteinToGenome	proteinToGenome
proteinToGenome,EnsDb-method	proteinToGenome
proteinToTranscript	proteinToTranscript
returnFilterColumns	EnsDb-class
returnFilterColumns,EnsDb-method	EnsDb-class
returnFilterColumns<-	EnsDb-class
returnFilterColumns<-,EnsDb-method	EnsDb-class
runEnsDbApp	runEnsDbApp
select	EnsDb-AnnotationDbi
select,EnsDb-method	EnsDb-AnnotationDbi
SeqendFilter	Deprecated
seqinfo	EnsDb-class
seqinfo,EnsDb-method	EnsDb-class
seqlevels	EnsDb-class
seqlevels,EnsDb-method	EnsDb-class
seqlevels,GRangesFilter-method	Filter-classes
seqlevelsStyle	EnsDb-seqlevels
seqlevelsStyle,EnsDb-method	EnsDb-seqlevels
seqlevelsStyle<-	EnsDb-seqlevels
seqlevelsStyle<-,EnsDb-method	EnsDb-seqlevels
SeqnameFilter	Deprecated
seqnames,GRangesFilter-method	Filter-classes
SeqstartFilter	Deprecated
SeqstrandFilter	Deprecated
show	EnsDb-class
show,EnsDb-method	EnsDb-class
supportedFilters,EnsDb-method	Filter-classes
supportedSeqlevelsStyles	EnsDb-seqlevels
supportedSeqlevelsStyles,EnsDb-method	EnsDb-seqlevels
threeUTRsByTranscript,EnsDb-method	EnsDb-exonsBy
toSAF	EnsDb-exonsBy
toSAF,GRangesList-method	EnsDb-exonsBy
transcripts	EnsDb-exonsBy
transcripts,EnsDb-method	EnsDb-exonsBy
transcriptsBy	EnsDb-exonsBy
transcriptsBy,EnsDb-method	EnsDb-exonsBy
transcriptsByOverlaps,EnsDb-method	EnsDb-exonsBy
transcriptToCds	transcriptToCds
transcriptToGenome	transcriptToGenome
transcriptToProtein	transcriptToProtein
TxbiotypeFilter	Deprecated
TxExternalNameFilter	Filter-classes
TxExternalNameFilter-class	Filter-classes
TxidFilter	Deprecated
TxIsCanonicalFilter	Filter-classes
TxIsCanonicalFilter-class	Filter-classes
TxSupportLevelFilter	Filter-classes
TxSupportLevelFilter-class	Filter-classes
UniprotDbFilter	Filter-classes
UniprotDbFilter-class	Filter-classes
UniprotMappingTypeFilter	Filter-classes
UniprotMappingTypeFilter-class	Filter-classes
updateEnsDb	EnsDb-class
updateEnsDb,EnsDb-method	EnsDb-class
useMySQL	useMySQL-EnsDb-method
useMySQL,EnsDb-method	useMySQL-EnsDb-method
