Package: miaViz
Title: Microbiome Analysis Plotting and Visualization
Version: 1.6.0
Authors@R: 
    c(person(given = "Felix G.M.", family = "Ernst", role = c("aut"),
             email = "felix.gm.ernst@outlook.com",
             comment = c(ORCID = "0000-0001-5064-0928")),
      person(given = "Tuomas", family = "Borman", role = c("aut", "cre"),
             email = "tuomas.v.borman@utu.fi",
             comment = c(ORCID = "0000-0002-8563-8884")), 
      person(given = "Leo", family = "Lahti", role = c("aut"),
             email = "leo.lahti@iki.fi",
             comment = c(ORCID = "0000-0001-5537-637X"))
	     )
Description: 
    The miaViz package implements plotting function to work with TreeSummarizedExperiment
    and related objects in a context of microbiome analysis. Among others this 
    includes plotting tree, graph and microbiome series data. The package is part of the
    broader miaverse framework.
biocViews: Microbiome, Software, Visualization
License: Artistic-2.0 | file LICENSE
Encoding: UTF-8
LazyData: false
Depends: R (>= 4.0), SummarizedExperiment, TreeSummarizedExperiment,
        mia (>= 0.99), ggplot2, ggraph (>= 2.0)
Imports: methods, stats, S4Vectors, BiocGenerics, BiocParallel,
        DelayedArray, scater, ggtree, ggnewscale, viridis, tibble,
        tidytree, tidygraph, rlang, purrr, tidyr, dplyr, ape,
        DirichletMultinomial
Suggests: knitr, rmarkdown, BiocStyle, testthat, patchwork,
        microbiomeDataSets
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.1
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/miaViz
git_branch: RELEASE_3_16
git_last_commit: b72c5dd
git_last_commit_date: 2022-11-01
Date/Publication: 2022-11-07
NeedsCompilation: no
Packaged: 2022-11-09 00:50:33 UTC; biocbuild
Author: Felix G.M. Ernst [aut] (<https://orcid.org/0000-0001-5064-0928>),
  Tuomas Borman [aut, cre] (<https://orcid.org/0000-0002-8563-8884>),
  Leo Lahti [aut] (<https://orcid.org/0000-0001-5537-637X>)
Maintainer: Tuomas Borman <tuomas.v.borman@utu.fi>
Built: R 4.2.1; ; 2022-11-10 04:18:45 UTC; unix
