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| .HCAExplorer | The Project Browser Class |
| .ProjectView | The ProjectView class |
| activate.HCAExplorer | Activate projects, samples, or files to display in the HCAExplorer Object |
| checkExpressionMatricesAvailability | Download Expression Matrices with HCAExplorer |
| checkExpressionMatricesAvailability-method | Download Expression Matrices with HCAExplorer |
| download-expression-matrices | Download Expression Matrices with HCAExplorer |
| downloadExpressionMatrices | Download Expression Matrices with HCAExplorer |
| downloadExpressionMatrices-method | Download Expression Matrices with HCAExplorer |
| fields-method | List supported fields of an HCAExplorer object |
| filter.HCAExplorer | Filter an HCAExplorer object using fields and values |
| getManifest | Obtain metadata information from an HCAExplorer object |
| getManifest-method | Obtain metadata information from an HCAExplorer object |
| getManifestFileFormats | Show all possible manifest file formats for current selection |
| getManifestFileFormats-method | Show all possible manifest file formats for current selection |
| HCAExplorer | The Project Browser Class |
| HCAExplorer-class | The Project Browser Class |
| nextResults | Next Results |
| nextResults-method | Next Results |
| ProjectView-class | The ProjectView class |
| resetQuery | Reset all queries performed on an object |
| resetQuery-method | Reset all queries performed on an object |
| resetSelect | Reset a select perform on an HCAExplorer object. |
| resetSelect-method | Reset a select perform on an HCAExplorer object. |
| results | Obtain search unattenuated results tibble from an HCAExplorer Object |
| results-method | Obtain search unattenuated results tibble from an HCAExplorer Object |
| select.HCAExplorer | Select columns to display upon showing the object |
| show-method | Show HCAExplorer |
| undoQuery | Undo one or multiple queries performed on an object |
| undoQuery-method | Undo one or multiple queries performed on an object |
| values-method | List all values for certain fields in a HCAExplorer Object |
| viewProjects | View all metadata about a selection of projects |
| viewProjects-method | View all metadata about a selection of projects |
| [-method | Subset an HCAExplorer Object by row number or project name |
| `[`-method | Subset an HCAExplorer Object by row number or project name |