aa | The 'Proteins' Class for Proteomics Data And Meta-Data |
aa-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
acols | The 'Proteins' Class for Proteomics Data And Meta-Data |
addIdentificationData-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
addPeptideFragments | The 'Proteins' Class for Proteomics Data And Meta-Data |
addPeptideFragments-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
avarLabels | The 'Proteins' Class for Proteomics Data And Meta-Data |
avarLabels-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
calculateHeavyLabels | Calculate heavy labeled peptides |
class:Proteins | The 'Proteins' Class for Proteomics Data And Meta-Data |
cleave-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
etrid2grl | From a transcript identifier to 'GRanges' object |
isCleaved | The 'Proteins' Class for Proteomics Data And Meta-Data |
isForward | Are all the ranges on the same strand |
isReverse | Are all the ranges on the same strand |
length-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
metadata-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
metadata<--method | The 'Proteins' Class for Proteomics Data And Meta-Data |
names-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
p | Data accompanying the 'Pbase' package |
pcols | The 'Proteins' Class for Proteomics Data And Meta-Data |
pfeatures | The 'Proteins' Class for Proteomics Data And Meta-Data |
pfeatures-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
pfilter | The 'Proteins' Class for Proteomics Data And Meta-Data |
pfilter-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
plot-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
plotAsAnnotationTrack | Plot gene region and annotation tracks |
plotAsGeneRegionTrack | Plot gene region and annotation tracks |
pms | Data accompanying the 'Pbase' package |
Pparams | Class '"Pparams"' |
Pparams-class | Class '"Pparams"' |
pranges | The 'Proteins' Class for Proteomics Data And Meta-Data |
pranges-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
pranges<- | The 'Proteins' Class for Proteomics Data And Meta-Data |
pranges<--method | The 'Proteins' Class for Proteomics Data And Meta-Data |
proteinCoding | Only keep protein coding ranges |
proteinCoding-method | Only keep protein coding ranges |
proteinCoding-methods | Only keep protein coding ranges |
proteinCoverage | The 'Proteins' Class for Proteomics Data And Meta-Data |
Proteins | The 'Proteins' Class for Proteomics Data And Meta-Data |
Proteins-class | The 'Proteins' Class for Proteomics Data And Meta-Data |
Proteins-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
proteotypic | The 'Proteins' Class for Proteomics Data And Meta-Data |
pvarLabels | The 'Proteins' Class for Proteomics Data And Meta-Data |
pvarLabels-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
rmEmptyRanges | The 'Proteins' Class for Proteomics Data And Meta-Data |
seqnames-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
show-method | Class '"Pparams"' |
show-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
[-method | The 'Proteins' Class for Proteomics Data And Meta-Data |
[[-method | The 'Proteins' Class for Proteomics Data And Meta-Data |