CHANGES IN VERSION 1.4.1
------------------------
 o update vignette and fixing errors [2014-10-31 Fri]

CHANGES IN VERSION 1.4.0
------------------------
 o new release version for Bioc 3.0
 
CHANGES IN VERSION 1.3.8
------------------------
 o remove github link to MSGFgui since it has now been accepted
   [2014-10-03 Fri]
 o new MSnID section [2014-10-04 Sat]

CHANGES IN VERSION 1.3.7
------------------------
 o mzR ident section [2014-10-01 Wed]
 o HUPO2014 poster [2014-10-02 Thu]

CHANGES IN VERSION 1.3.6
------------------------
 o new MSGF+/gui sections contributed by Thomas [2014-10-01 Wed]

CHANGES IN VERSION 1.3.5
------------------------
 o Proteomics workflow (from Bioc2014 workshop) [2014-08-17 Sun]
 o Mention viz vig requires Bioc >= 3.0 and link to on-line version
   [2014-08-27 Wed]
 o Link to shiyapps/shinyMA [2014-09-03 Wed]
 o added QC section [2014-10-01 Wed]

CHANGES IN VERSION 1.3.4
------------------------
 o Using BiocStyle [2014-08-16 Sat]

CHANGES IN VERSION 1.3.3
------------------------
 o Many more sections to RProtVis vignette [2014-08-13 Wed]

CHANGES IN VERSION 1.3.2
------------------------
 o RforProteomics wiki on github [2014-08-02 Sat]
 o Proteomics viz vignette [2014-08-06 Wed]
 o shinyMA function [2014-08-07 Thu]
 o fix PXD000001 PRIDE urls [2014-08-08 Fri]
 o add protViz CRAN package to vig [2014-08-09 Sat]
 o RProtVis vignette needs MALDIquant >= 1.11 now [2014-08-11 Mon]

CHANGES IN VERSION 1.3.1
------------------------
 o get biocView packages as a function [2014-07-23 Wed]
 o various typos and updates in vignette [2014-07-23 Wed]
 o functions to get packages for a biocView [2014-07-23 Wed]
 o relying on cache to reduce build time [2014-07-24 Thu]

CHANGES IN VERSION 1.0.18
-------------------------
 o pxr renamed rpx [2014-03-28]

CHANGES IN VERSION 1.0.17
-------------------------
 o using pxr to download data from the PX repository [2014-03-24 Mon]

CHANGES IN VERSION 1.0.16
-------------------------
 o new downloadData and getThermoHelaPRTC functions [2013-12-14 Sat]

CHANGES IN VERSION 1.0.13
-------------------------
 o Updates in the MALDIquant section <2013-09-08 Sun>
 o Fixed new warnings in vignette: cols - columns <2013-09-18 Wed>
 o do not cache package listing code <2013-09-19 Thu>

CHANGES IN VERSION 1.0.12
-------------------------
 o Moving cleaver to enhances to all building on Bioc release <2013-07-19 Fri>

CHANGES IN VERSION 1.0.11
-------------------------
 o Adding twitter account to README <2013-07-12 Fri>

CHANGES IN VERSION 1.0.10
-------------------------
 o clarify reamde <2013-07-08 Mon> 
 o added Bioc2013 poster as static vignette <2013-07-12 Fri>

CHANGES IN VERSION 1.0.9
------------------------
 o devel use clarification in readme <2013-07-08 Mon>
 o cite arXiv in vigette <2013-07-08 Mon>
 o cite R4P mailing list in vignette <2013-07-08 Mon>

CHANGES IN VERSION 1.0.8
------------------------
 o rbioc-sig-proteomics group references in readme <2013-07-03 Wed>
 o added a twitter hook to the github repo <2013-07-03 Wed>
 o Sebastian is now contributor <2013-07-05 Fri>
 o Sebastian added new cleaver section in vignette <2013-07-05 Fri>
 o document useDevel in README.md <2013-07-05 Fri>

CHANGES IN VERSION 1.0.7
------------------------
 o updated README.md and added TM repo to vignette <2013-07-02 Tue>

CHANGES IN VERSION 1.0.6
------------------------
 o Updated bib file and added CITATION <2013-06-07 Fri>

CHANGES IN VERSION 1.0.5
------------------------
 o MALDIquant: remove misleading length calls by 
   Sebastian Gibb <2013-05-24 Fri>

CHANGES IN VERSION 1.0.4
------------------------
 o importBrukerFlex: set verbose=FALSE, contributed 
   by Sebastian Gibb <2013-05-01 Wed>

CHANGES IN VERSION 1.0.3
------------------------
 o Updates in the MALDIquant section, contributed 
   by Sebastian Gibb <2013-04-26 Fri>

CHANGES IN VERSION 1.0.2
------------------------
 o update in vignette NetCDF installation <2013-04-19 Fri>
 o more similar updates <2013-04-24 Wed>

CHANGES IN VERSION 1.0.1
------------------------
 o fixed 'doc/vigsrc/' to 'doc/vigsrc' in vignette <2013-04-09 Tue> 
 o typos and installation section in vignette <2013-04-09 Tue>

CHANGES IN VERSION 1.0.0
------------------------
 o bumping version for stable release <2013-04-06 Sat>
 o Adding rTANDEM as Suggests <2013-04-06 Sat>
 o Update and rebuild vignette with R 3.0.0 stable <2013-04-06 Sat>

CHANGES IN VERSION 0.99.3
-------------------------
 o Bioc version bump

CHANGES IN VERSION 0.99.2
-------------------------
 o removing rTANDEM from Suggests, as the package 
   currently fails to build and results in R4P 
   checking errors. Will add it again when 
   builds <2013-02-20 Wed>

CHANGES IN VERSION 0.99.1
-------------------------
 o adding pre-build vignette <2013-02-20 Wed>

CHANGES IN VERSION 0.99.0
-------------------------
 o typo in startup msg <2013-01-09 Wed>
 o update README.md with R-2.15.2 installation 
   instructions <2013-01-09 Wed>
 o Major updates to vignette <2013-02-15 Fri>
 o Added rTANDEM <2013-02-15 Fri>

CHANGES IN VERSION 0.2.2
------------------------
 o removed Makefile from .Rbuildignore <2012-10-22 Mon>
 o Using mzXML from ProteomeXchange repo <2012-10-23 Tue>
 o using parallel quant <2012-10-23 Tue>

CHANGES IN VERSION 0.2.1
------------------------
 o added visible library("MSnbase") in vignette <2012-10-17 Wed>

CHANGES IN VERSION 0.2.0
------------------------
 o Added NEWS file <2012-10-05 Fri>
