Package: RforProteomics
Type: Package
Title: Companion package to the 'Using R and Bioconductor for
        proteomics data analysis' publication
Version: 1.4.1
Authors@R: c(person("Laurent", "Gatto", role=c("aut", "cre"),
                    email="lg390@cam.ac.uk"),
             person("Sebastian", "Gibb", role="ctb",
                    email="mail@sebastiangibb.de"),
             person("Vlad", "Petyuk", role="ctb",
                    email="petyuk@gmail.com"),
             person('Thomas', 'Pedersen', 'Lin', role='ctb',
                    email='thomasp85@gmail.com'))
Maintainer: Laurent Gatto <lg390@cam.ac.uk>
Depends: MSnbase
Imports: R.utils, Biobase, rpx, biocViews, BiocInstaller,
        interactiveDisplay, shiny
Suggests: mzR, xcms, msdata, isobar, MALDIquant (>= 1.11),
        MALDIquantForeign, readBrukerFlexData, rTANDEM, synapter,
        synapterdata, IPPD, Rdisop, OrgMassSpecR, BRAIN, rols, hpar,
        GO.db, org.Hs.eg.db, biomaRt, RColorBrewer, ggplot2, reshape2,
        xtable, lattice, mzID, pRoloc, pRolocdata, knitr, BiocStyle,
        MSGFplus, MSGFgui, MSnID
Enhances: cleaver
Description: This package contains code to illustrate the 'Using R and
	     Bioconductor for proteomics data analysis' paper. Two
	     vignettes describe the code and data needed to reproduce
	     the examples and figures descibed in the paper and
	     functionality for proteomics visualisation.
URL: http://lgatto.github.com/RforProteomics/
biocViews: ExperimentData, MassSpectrometry, Proteomics,
        MassSpectrometryData
License: Artistic-2.0
VignetteBuilder: knitr
Author: Laurent Gatto [aut, cre], Thomas Lin Pedersen [ctb],
	Sebastian Gibb [ctb], Vlad Petyuk [ctb]
Packaged: 2014-11-19 15:38:23 UTC; biocbuild
Built: R 3.1.2; ; 2014-11-19 19:06:56 UTC; unix
