Converting experimental metadata from ISA-tab into Bioconductor data structures


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Documentation for package ‘Risa’ version 1.0.0

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Risa-package Risa package overview
ISAtab-class Class '"ISAtab"', a class for maintaing ISAtab information
processAssayXcmsSet Build an xcmsSet object given a mass spectrometry assay
readISAtab Reads an ISAtab dataset into an R object.
Risa Risa package overview
updateAssayMetadata Update metadata into the assay file
write.assay.file Write an Assay File from the ISA-Tab dataset
write.investigation.file Writes the Investigation File of an ISA-Tab dataset
write.ISAtab Write an ISA-Tab dataset
write.study.file Write a Study File of an ISA-Tab dataset
[-method Class '"ISAtab"', a class for maintaing ISAtab information
[<--method Class '"ISAtab"', a class for maintaing ISAtab information