QUALIFIER-package |
QUALIFIER: A package that provides automated flow data quality assessment based on gated cell populations |
db |
Create a list of 'qaTask' objects |
description,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
formula,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
getData,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
getName,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
getPop,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
getQAStats |
Calculate and extract the statistics from the gating hierarchies. |
getQAStats-method |
Calculate and extract the statistics from the gating hierarchies. |
getQAStats-methods |
Calculate and extract the statistics from the gating hierarchies. |
makeQaTask |
Create a list of 'qaTask' objects |
outlier.cutoff |
outliers detection functions |
outlier.norm |
outliers detection functions |
outlier.t |
outliers detection functions |
outlierFunctions |
outliers detection functions |
plot |
plot the statistics for a particular cell population of a group of samples |
plot-method |
plot the statistics for a particular cell population of a group of samples |
plotType,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
proportion.outliers.mle |
outliers detection functions |
proportion.outliers.robust |
outliers detection functions |
qaCheck |
Perform the quality assessment for the qaTask object |
qaCheck-method |
Perform the quality assessment for the qaTask object |
qaCheck-methods |
Perform the quality assessment for the qaTask object |
qaCheckList |
Create a list of 'qaTask' objects |
qaID,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qaLevel,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qaPreprocess |
a wrapper function |
qaReport |
create quality assessment report |
qaReport-method |
create quality assessment report |
qaReport-methods |
create quality assessment report |
qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qaTask-class |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qoutlier |
outliers detection functions |
qpar |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qpar-method |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qpar<- |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
qpar<--method |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
QUALIFIER |
QUALIFIER: A package that provides automated flow data quality assessment based on gated cell populations |
rlm |
Perform the quality assessment for the qaTask object |
saveToDB |
Calculate and extract the statistics from the gating hierarchies. |
show,qaTask |
'qaTask': a class for storing important information of flow cytometry data quality assessment task |
tubesevents |
Create a list of 'qaTask' objects |