LDdata                  Simulated LD Block Data
compPermTDT2way         Permutation-Based gTDT for Two-Way Interactions
findLDblocks            Identifying LD blocks
freq.hap                Examples for Haplotype Frequencies for
                        Simulation
getLD                   Computation of LD Measures
ped2geno                Transformation of Ped-File
plot.LDblocks           Plotting a LDblock Object
plot.getLD              Plotting a getLD Object
read.pedfile            Reading a Ped File
tdt                     Genotypic TDT
tdt2way                 Genotypic TDT for Two-Way Interactions
trio                    Generate Trio Data Format Suitable for Trio
                        Logic Regression
trio.check              Check Case-Parent Trio Data for Mendelian
                        Errors
trio.gen1               Genotype Data for Trios
trio.sim                Simulate Case-Parent Trios with Population
                        Disease Risk Dependent on SNP-SNP Interaction
